RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ZNF556Q9HAH1 456 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 ZNF319Q9P2F9 582 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 KLHDC2Q9Y2U9 406 aa18.24■□□□□ 0.51
LIME1-203ENST00000465591 PPIAL4EA0A075B759 164 aa18.23■□□□□ 0.51
LIME1-203ENST00000465591 PPIAL4CA0A0B4J2A2 164 aa18.23■□□□□ 0.51
LIME1-203ENST00000465591 PPIAL4DF5H284 164 aa18.23■□□□□ 0.51
LIME1-203ENST00000465591 PPIAL4FP0DN26 164 aa18.23■□□□□ 0.51
LIME1-203ENST00000465591 PAICSP22234 425 aaKnown RBP18.23■□□□□ 0.51
LIME1-203ENST00000465591 GATA3P23771 443 aa18.23■□□□□ 0.51
LIME1-203ENST00000465591 OPRL1P41146 370 aa18.23■□□□□ 0.51
LIME1-203ENST00000465591 GRB2P62993 217 aaKnown RBP18.23■□□□□ 0.51
LIME1-203ENST00000465591 MUC20Q8N307 709 aaPredicted RBP18.23■□□□□ 0.51
LIME1-203ENST00000465591 Q8TCH9 128 aa18.23■□□□□ 0.51
LIME1-203ENST00000465591 SPSB4Q96A44 273 aa18.23■□□□□ 0.51
LIME1-203ENST00000465591 SLC25A19Q9HC21 320 aa18.23■□□□□ 0.51
LIME1-203ENST00000465591 DNAJC27Q9NZQ0 273 aa18.23■□□□□ 0.51
LIME1-203ENST00000465591 TBX1O43435 398 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 PTBP3O95758 552 aaKnown RBP18.22■□□□□ 0.51
LIME1-203ENST00000465591 HMGN1P05114 100 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 ANXA2P07355 339 aaKnown RBP18.22■□□□□ 0.51
LIME1-203ENST00000465591 ZNF12P17014 697 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 SLC2A5P22732 501 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 SLC15A1P46059 708 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 DAPP51397 102 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 ZNF121P58317 390 aaPredicted RBP18.22■□□□□ 0.51
LIME1-203ENST00000465591 ZNF404Q494X3 552 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 KLHL12Q53G59 568 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 FAHD1Q6P587 224 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 FAM57BQ71RH2 274 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 ASRGL1Q7L266 308 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 SLC16A9Q7RTY1 509 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 SGK3Q96BR1 496 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 MRPL15Q9P015 296 aaKnown RBP18.22■□□□□ 0.51
LIME1-203ENST00000465591 FBN3Q75N90 2809 aa18.22■□□□□ 0.51
LIME1-203ENST00000465591 LRRC30A6NM36 301 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 XRCC2O43543 280 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 RPS2P15880 293 aaKnown RBP18.21■□□□□ 0.51
LIME1-203ENST00000465591 HSD11B1P28845 292 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 NAA10P41227 235 aaPredicted RBP18.21■□□□□ 0.51
LIME1-203ENST00000465591 FAM3AP98173 230 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 PAX2Q02962 417 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 ZNF154Q13106 437 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 ESCO2Q56NI9 601 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 LYPD2Q6UXB3 125 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 SHFQ7M4L6 423 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 KLBQ86Z14 1044 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 OTOSQ8NHW6 89 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 NRBF2Q96F24 287 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 SLC22A4Q9H015 551 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 TOR3AQ9H497 397 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 PPP1R3EQ9H7J1 279 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 BRD7Q9NPI1 651 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 PPIAL4AQ9Y536 164 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 INSIG2Q9Y5U4 225 aa18.21■□□□□ 0.51
LIME1-203ENST00000465591 ANK2Q01484 3957 aa18.2■□□□□ 0.5
LIME1-203ENST00000465591 PRODHO43272 600 aa18.2■□□□□ 0.5
LIME1-203ENST00000465591 GMDSO60547 372 aa18.2■□□□□ 0.5
LIME1-203ENST00000465591 CIB2O75838 187 aa18.2■□□□□ 0.5
LIME1-203ENST00000465591 FSTL3O95633 263 aa18.2■□□□□ 0.5
LIME1-203ENST00000465591 C1orf87Q8N0U7 546 aa18.2■□□□□ 0.5
LIME1-203ENST00000465591 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.2■□□□□ 0.5
LIME1-203ENST00000465591 NANPQ8TBE9 248 aa18.2■□□□□ 0.5
LIME1-203ENST00000465591 ERGIC1Q969X5 290 aa18.2■□□□□ 0.5
LIME1-203ENST00000465591 REEP6Q96HR9 211 aa18.2■□□□□ 0.5
LIME1-203ENST00000465591 SLC6A7Q99884 636 aa18.2■□□□□ 0.5
LIME1-203ENST00000465591 PAPOLBQ9NRJ5 636 aaKnown RBP18.2■□□□□ 0.5
LIME1-203ENST00000465591 LRCH1Q9Y2L9 728 aa18.2■□□□□ 0.5
LIME1-203ENST00000465591 hCG_38984A0A1B0GV85 526 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 MITFO75030 526 aaPredicted RBP18.19■□□□□ 0.5
LIME1-203ENST00000465591 LYNP07948 512 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 H2BFMP0C1H6 154 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 HCCSP53701 268 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 CRISP1P54107 249 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 TIGD6Q17RP2 521 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 ZNF826PQ6ZT77 177 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 WDR86Q86TI4 376 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 TEX29Q8N6K0 151 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 OR11L1Q8NGX0 322 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 OR5K1Q8NHB7 308 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 THEM6Q8WUY1 208 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 C22orf15Q8WYQ4 148 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 DACT3Q96B18 629 aaPredicted RBP18.19■□□□□ 0.5
LIME1-203ENST00000465591 SSBP3Q9BWW4 388 aaPredicted RBP18.19■□□□□ 0.5
LIME1-203ENST00000465591 OPA3Q9H6K4 179 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 TVP23BQ9NYZ1 205 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 MIOXQ9UGB7 285 aa18.19■□□□□ 0.5
LIME1-203ENST00000465591 A0A0A6YYJ9 748 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 CCDC182A6NF36 153 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 M0R129 80 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 IRF2P14316 349 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 EPHA2P29317 976 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 CD80P33681 288 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 APOFQ13790 326 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 ATP6AP1Q15904 470 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 SNAPC1Q16533 368 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 KLF17Q5JT82 389 aaPredicted RBP18.18■□□□□ 0.5
LIME1-203ENST00000465591 SLC35D3Q5M8T2 416 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 C1orf146Q5VVC0 180 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 LRRN1Q6UXK5 716 aa18.18■□□□□ 0.5
LIME1-203ENST00000465591 RHOUQ7L0Q8 258 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms