RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 SLC36A3Q495N2 470 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 GLYATQ6IB77 296 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 HACD2Q6Y1H2 254 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 PGAP1Q75T13 922 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 ZBTB46Q86UZ6 589 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 FAM86B1Q8N7N1 296 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 BOLLQ8N9W6 283 aaKnown RBP8.04□□□□□ -1.12
USP39-212ENST00000465514 ZSCAN4Q8NAM6 433 aaPredicted RBP8.04□□□□□ -1.12
USP39-212ENST00000465514 OR4K13Q8NH42 304 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 FANK1Q8TC84 345 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 SPRYD4Q8WW59 207 aaPredicted RBP8.04□□□□□ -1.12
USP39-212ENST00000465514 ITPKCQ96DU7 683 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 FAM71F1Q96KD3 344 aaPredicted RBP8.04□□□□□ -1.12
USP39-212ENST00000465514 DHRS1Q96LJ7 313 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 TECTBQ96PL2 329 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 ATF6BQ99941 703 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 PCGF1Q9BSM1 259 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 MMADHCQ9H3L0 296 aaPredicted RBP8.04□□□□□ -1.12
USP39-212ENST00000465514 C16orf95Q9H693 158 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 PNRC2Q9NPJ4 139 aaKnown RBP8.04□□□□□ -1.12
USP39-212ENST00000465514 RPRD1BQ9NQG5 326 aaKnown RBP8.04□□□□□ -1.12
USP39-212ENST00000465514 DCAF13Q9NV06 445 aaKnown RBP8.04□□□□□ -1.12
USP39-212ENST00000465514 CYB5R1Q9UHQ9 305 aa8.04□□□□□ -1.12
USP39-212ENST00000465514 DNAH7Q8WXX0 4024 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 OR6C68A6NDL8 312 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 ZNF879B4DU55 563 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 P2RY10O00398 339 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 ARPC3O15145 178 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 XPNPEP2O43895 674 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 CCDC22O60826 627 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 TOX4O94842 621 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 IGHV4-59P01825 116 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 HLA-DQA2P01906 255 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 NOS3P29474 1203 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 SLC6A6P31641 620 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 GGT2P36268 569 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 CFHR2P36980 270 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 NPY4RP50391 375 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 NUDT2P50583 147 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 TPTEP56180 551 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 PSME3P61289 254 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 CD276Q5ZPR3 534 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 SFRP4Q6FHJ7 346 aaPredicted RBP8.03□□□□□ -1.12
USP39-212ENST00000465514 Q6ZTK2 550 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 MRPL21Q7Z2W9 205 aaKnown RBP8.03□□□□□ -1.12
USP39-212ENST00000465514 C11orf44Q8N8P7 122 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 TBC1D15Q8TC07 691 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 MAP6Q96JE9 813 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 TBX15Q96SF7 602 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 IFT27Q9BW83 186 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 OR52D1Q9H346 318 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 FN3KQ9H479 309 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 GAR1Q9NY12 217 aaKnown RBP8.03□□□□□ -1.12
USP39-212ENST00000465514 KIF17Q9P2E2 1029 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 ERVK-18Q9QC07 812 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 RNF7Q9UBF6 113 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 ABCD2Q9UBJ2 740 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 CTSZQ9UBR2 303 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 SAMD4AQ9UPU9 718 aaKnown RBP8.03□□□□□ -1.12
USP39-212ENST00000465514 PCLOQ9Y6V0 5065 aa8.03□□□□□ -1.12
USP39-212ENST00000465514 CENPVL3A0A0U1RRI6 287 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 ZNF816-ZNF321PA0A0X1KG74 233 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 CD300LBA8K4G0 201 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 M0R135 149 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 LGALS8O00214 317 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 TNFRSF13BO14836 293 aaPredicted RBP8.02□□□□□ -1.13
USP39-212ENST00000465514 ADAM20O43506 726 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 IDH3BO43837 385 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 GMDSO60547 372 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 GADD45GO95257 159 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 LIPFP07098 398 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 MMP9P14780 707 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 SMIM11AP58511 58 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 ZNF92Q03936 586 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 HERPUD1Q15011 391 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 OR8B8Q15620 311 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 KCNJ8Q15842 424 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 SNAI3Q3KNW1 292 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 DEFB121Q5J5C9 76 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 SLC35F1Q5T1Q4 408 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 SDR9C7Q8NEX9 313 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 SPTSSAQ969W0 71 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 ZNF799Q96GE5 643 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 WDFY2Q96P53 400 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 ADAT1Q9BUB4 502 aaKnown RBP8.02□□□□□ -1.13
USP39-212ENST00000465514 SLC22A4Q9H015 551 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 NSRP1Q9H0G5 558 aaKnown RBP8.02□□□□□ -1.13
USP39-212ENST00000465514 CCDC134Q9H6E4 229 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 MRPL22Q9NWU5 206 aaKnown RBP8.02□□□□□ -1.13
USP39-212ENST00000465514 NOP16Q9Y3C1 178 aaKnown RBP8.02□□□□□ -1.13
USP39-212ENST00000465514 PCDHGB5Q9Y5G0 923 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 V9GYQ6 96 aa8.02□□□□□ -1.13
USP39-212ENST00000465514 TRAV38-1A0A0B4J264 116 aa8.01□□□□□ -1.13
USP39-212ENST00000465514 GGT3PA6NGU5 568 aa8.01□□□□□ -1.13
USP39-212ENST00000465514 C3orf84H3BNL1 204 aa8.01□□□□□ -1.13
USP39-212ENST00000465514 NDUFA2O43678 99 aa8.01□□□□□ -1.13
USP39-212ENST00000465514 OR10H3O60404 316 aa8.01□□□□□ -1.13
USP39-212ENST00000465514 GMNNO75496 209 aa8.01□□□□□ -1.13
USP39-212ENST00000465514 PTBP3O95758 552 aaKnown RBP8.01□□□□□ -1.13
USP39-212ENST00000465514 GYPAP02724 150 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms