RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 TBX5Q99593 518 aa15.08■□□□□ 0
COL7A1-205ENST00000465238 SOX7Q9BT81 388 aa15.08■□□□□ 0
COL7A1-205ENST00000465238 TTTY10Q9BZA0 68 aa15.08■□□□□ 0
COL7A1-205ENST00000465238 TPK1Q9H3S4 243 aa15.08■□□□□ 0
COL7A1-205ENST00000465238 BRD7Q9NPI1 651 aa15.08■□□□□ 0
COL7A1-205ENST00000465238 CYSLTR2Q9NS75 346 aa15.08■□□□□ 0
COL7A1-205ENST00000465238 PURGQ9UJV8 347 aaKnown RBP15.08■□□□□ 0
COL7A1-205ENST00000465238 RRP15Q9Y3B9 282 aaKnown RBP15.08■□□□□ 0
COL7A1-205ENST00000465238 LRP12Q9Y561 859 aa15.08■□□□□ 0
COL7A1-205ENST00000465238 H0YJX3 145 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 PSMD9O00233 223 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 TBX1O43435 398 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 RRP9O43818 475 aaKnown RBP15.07■□□□□ 0
COL7A1-205ENST00000465238 SELEP16581 610 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 KITLGP21583 273 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 RIDAP52758 137 aaKnown RBP15.07■□□□□ 0
COL7A1-205ENST00000465238 ZNF121P58317 390 aaPredicted RBP15.07■□□□□ 0
COL7A1-205ENST00000465238 ROM1Q03395 351 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 RIN1Q13671 783 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 CR1LQ2VPA4 569 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 SNAI3Q3KNW1 292 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 USP51Q70EK9 711 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 FAM57BQ71RH2 274 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 MRPL21Q7Z2W9 205 aaKnown RBP15.07■□□□□ 0
COL7A1-205ENST00000465238 PGAM5Q96HS1 289 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 CGGBP1Q9UFW8 167 aaPredicted RBP15.07■□□□□ 0
COL7A1-205ENST00000465238 RPL36Q9Y3U8 105 aaKnown RBP15.07■□□□□ 0
COL7A1-205ENST00000465238 PCDHGB1Q9Y5G3 927 aa15.07■□□□□ 0
COL7A1-205ENST00000465238 A0A1W2PQL4 384 aaPredicted RBP15.06■□□□□ 0
COL7A1-205ENST00000465238 C17orf100A8MU93 164 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 XRCC2O43543 280 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 ZNF81P51508 661 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 EGR3Q06889 387 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 GK2Q14410 553 aaPredicted RBP15.06■□□□□ 0
COL7A1-205ENST00000465238 ZMAT1Q5H9K5 638 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 OR2T2Q6IF00 324 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 PGAP1Q75T13 922 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 C8orf59Q8N0T1 100 aaPredicted RBP15.06■□□□□ 0
COL7A1-205ENST00000465238 RFLNBQ8N5W9 214 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 LINC01356Q8N9X3 169 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 OR52H1Q8NGJ2 320 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 OR10A2Q9H208 303 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 AMBNQ9NP70 447 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 HSPE1-MOB4S4R3N1 261 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 NBEAL1Q6ZS30 2694 aa15.06■□□□□ 0
COL7A1-205ENST00000465238 PRR32B1ATL7 298 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 KRT8P05787 483 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 DBTP11182 482 aaKnown RBP15.05■□□□□ -0
COL7A1-205ENST00000465238 IL2RGP31785 369 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 DCTDP32321 178 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 MMP15P51511 669 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 PSMA6P60900 246 aaKnown RBP15.05■□□□□ -0
COL7A1-205ENST00000465238 ISL1P61371 349 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 ACTC1P68032 377 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 ACTA1P68133 377 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 ZNF92Q03936 586 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 ZNF91Q05481 1191 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 TIGD6Q17RP2 521 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 PCGF3Q3KNV8 242 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 KLHL22Q53GT1 634 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 TMEM255AQ5JRV8 349 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 GLYATL3Q5SZD4 288 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 OR5AS1Q8N127 324 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 OR2AE1Q8NHA4 323 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 APH1BQ8WW43 257 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 TFAP2CQ92754 450 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 LGALS12Q96DT0 336 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 C19orf24Q9BVV8 132 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 OPA3Q9H6K4 179 aa15.05■□□□□ -0
COL7A1-205ENST00000465238 EXOGQ9Y2C4 368 aaKnown RBP15.05■□□□□ -0
COL7A1-205ENST00000465238 ANK2Q01484 3957 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 TMEM269A0A1B0GVZ9 245 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 DAPL1A0PJW8 107 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 C5orf63A6NC05 138 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 GGT3PA6NGU5 568 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 ACOD1A6NK06 481 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 MAGEB4O15481 346 aaPredicted RBP15.04■□□□□ -0
COL7A1-205ENST00000465238 SPRY3O43610 288 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 WBP4O75554 376 aaKnown RBP15.04■□□□□ -0
COL7A1-205ENST00000465238 FADS2O95864 444 aaKnown RBP15.04■□□□□ -0
COL7A1-205ENST00000465238 AQP4P55087 323 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 CDH15P55291 814 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 ZNF829Q3KNS6 432 aaPredicted RBP15.04■□□□□ -0
COL7A1-205ENST00000465238 LIPNQ5VXI9 398 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 PLEKHG7Q6ZR37 379 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 PRSS45Q7RTY3 260 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 YIPF7Q8N8F6 280 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 CNIH3Q8TBE1 160 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 SPRYD4Q8WW59 207 aaPredicted RBP15.04■□□□□ -0
COL7A1-205ENST00000465238 GTF3AQ92664 365 aaKnown RBP15.04■□□□□ -0
COL7A1-205ENST00000465238 SGK3Q96BR1 496 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 C1orf159Q96HA4 380 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 DIRC2Q96SL1 478 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 MSL2Q9HCI7 577 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 ZDHHC8Q9ULC8 765 aa15.04■□□□□ -0
COL7A1-205ENST00000465238 METTL15A6NJ78 407 aa15.03■□□□□ -0
COL7A1-205ENST00000465238 LYNX1G3V0Z9 82 aa15.03■□□□□ -0
COL7A1-205ENST00000465238 TPD52L2O43399 206 aaKnown RBP15.03■□□□□ -0
COL7A1-205ENST00000465238 GNAO1P09471 354 aa15.03■□□□□ -0
COL7A1-205ENST00000465238 LYNX1P0DP58 116 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms