RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ST7LQ8TDW4 575 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 SMIM8Q96KF7 97 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 ST6GALNAC5Q9BVH7 336 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 IGFLR1Q9H665 355 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 VSX1Q9NZR4 365 aaPredicted RBP11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 GHRLQ9UBU3 117 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 GPR132Q9UNW8 380 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 hCG_1809904A0A1W2PP81 198 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 A0A1W2PR64 198 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 A0A1W2PRV1 198 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 NUDT21O43809 227 aaKnown RBP11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 KLF8O95600 359 aaPredicted RBP11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 NTSR1P30989 418 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 FOXL2P58012 376 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 HHEXQ03014 270 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 SGCBQ16585 318 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 PNLIPRP3Q17RR3 467 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 FAHD2BQ6P2I3 314 aaPredicted RBP11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 TMPRSS9Q7Z410 1059 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 FAHD2AQ96GK7 314 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 RTBDNQ9BSG5 229 aaPredicted RBP11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 EMC6Q9BV81 110 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 IL23AQ9NPF7 189 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 PRODH2Q9UF12 536 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 MIOXQ9UGB7 285 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 FLVCR1Q9Y5Y0 555 aa11.19□□□□□ -0.62
CLCNKA-204ENST00000464764 C1orf196B1AJZ1 125 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 PLPP3O14495 311 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 CD5P06127 495 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 RAB6AP20340 208 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 OR1D4P47884 311 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 SPEM2Q0P670 501 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 ARMC6Q6NXE6 501 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 GALNTL5Q7Z4T8 443 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 OR6S1Q8NH40 331 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 EDARADDQ8WWZ3 215 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 KIRREL1Q96J84 757 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 SMCO4Q9NRQ5 59 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 CACFD1Q9UGQ2 172 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 TMED7-TICAM2A0A0A6YYA0 188 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 SYT7O43581 403 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 SFT2D2O95562 160 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 KNG1P01042 644 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 TTRP02766 147 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 CSTBP04080 98 aaKnown RBP11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 H2BFMP0C1H6 154 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 MPZP25189 248 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 TMEM50BP56557 158 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 OR2B8PP59922 312 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 SKA3Q8IX90 412 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 CCNL2Q96S94 520 aaPredicted RBP11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 AMDHD2Q9Y303 409 aa11.18□□□□□ -0.62
CLCNKA-204ENST00000464764 A0A1W2PPH5 198 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 B4DGG1 531 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 FAM157AC9JC47 383 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 ARG1P05089 322 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 S100A9P06702 114 aaKnown RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 NQO2P16083 231 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 HNRNPA2B1P22626 353 aaKnown RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 FHITP49789 147 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 C1orf140Q5VVS0 124 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 GLIPR1L1Q6UWM5 242 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 C16orf47Q6ZP98 133 aaPredicted RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 Q6ZRG5 221 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 PTX4Q96A99 478 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 LPAR5Q9H1C0 372 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 SLC26A1Q9H2B4 701 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 PMS2P1A4D2B8 440 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 DXOO77932 396 aaKnown RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 GP1BBP13224 206 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 ZNF93P35789 620 aaPredicted RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 OR3A4PP47883 348 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 SLC6A9P48067 706 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 CYCSP99999 105 aaKnown RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 CDCP2Q5VXM1 449 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 LCN10Q6JVE6 187 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 BTNL8Q6UX41 500 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 LURAP1LQ8IV03 231 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 TMEM151BQ8IW70 566 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 OR13G1Q8NGZ3 307 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 OR51E1Q8TCB6 317 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 BSCL2Q96G97 398 aaPredicted RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 ARHGAP5-AS1Q96IT6 56 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 ARL5BQ96KC2 179 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 DUSP15Q9H1R2 295 aaPredicted RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 SLCO1B1Q9Y6L6 691 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 C2orf16Q68DN1 1984 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 EIF1BO60739 113 aaKnown RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 NDUFS6O75380 124 aaKnown RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 ISG15P05161 165 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 EIF1P41567 113 aaKnown RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 EFNA3P52797 238 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 TMEM244Q5VVB8 128 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 ZNF704Q6ZNC4 412 aaPredicted RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 SLC22A24Q8N4F4 322 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 NKAIN3Q8N8D7 197 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 OR5D18Q8NGL1 313 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 SLC25A43Q8WUT9 341 aaPredicted RBP11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 AQP10Q96PS8 301 aa11.17□□□□□ -0.62
CLCNKA-204ENST00000464764 NUDT22Q9BRQ3 303 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms