RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 PMELP40967 661 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 EIF1P41567 113 aaKnown RBP2.38□□□□□ -2.03
CLK1-208ENST00000464454 PPICP45877 212 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 TAS2R31P59538 309 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 CACNG7P62955 275 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 PIGHQ14442 188 aaPredicted RBP2.38□□□□□ -2.03
CLK1-208ENST00000464454 RBMY1FQ15415 496 aaKnown RBP2.38□□□□□ -2.03
CLK1-208ENST00000464454 GABRA6Q16445 453 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 ZNF829Q3KNS6 432 aaPredicted RBP2.38□□□□□ -2.03
CLK1-208ENST00000464454 TMEM256Q8N2U0 113 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 OR5AR1Q8NGP9 310 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 NAT6Q93015 286 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 RCN3Q96D15 328 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 NEURL3Q96EH8 262 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 RBBP8Q99708 897 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 TBL1YQ9BQ87 522 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 GGTLC1Q9BX51 225 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 EXOSC4Q9NPD3 245 aaKnown RBP2.38□□□□□ -2.03
CLK1-208ENST00000464454 RPRD1BQ9NQG5 326 aaKnown RBP2.38□□□□□ -2.03
CLK1-208ENST00000464454 RRAGDQ9NQL2 400 aaPredicted RBP2.38□□□□□ -2.03
CLK1-208ENST00000464454 GGA2Q9UJY4 613 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 MROH7Q68CQ1 1323 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 ADGRA3Q8IWK6 1321 aa2.38□□□□□ -2.03
CLK1-208ENST00000464454 TRAV40A0A0B4J280 105 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 NDUFC2-KCTD14E9PQ53 114 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 SIVA1O15304 175 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 RAD1O60671 282 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 GLSO94925 669 aaPredicted RBP2.37□□□□□ -2.03
CLK1-208ENST00000464454 SCELO95171 688 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 MPZL1O95297 269 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 PAHP00439 452 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 CD74P04233 296 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 ZNF806P0C7X5 589 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 ZNF286BP0CG31 522 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 GFAPP14136 432 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 GABRG2P18507 467 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 POLR2IP36954 125 aaKnown RBP2.37□□□□□ -2.03
CLK1-208ENST00000464454 MYCNOSP40205 109 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 PEX19P40855 299 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 YWHAEP62258 255 aaKnown RBP2.37□□□□□ -2.03
CLK1-208ENST00000464454 CYP24A1Q07973 514 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 PPIDQ08752 370 aaKnown RBP2.37□□□□□ -2.03
CLK1-208ENST00000464454 SLC39A6Q13433 755 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 PNOCQ13519 176 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 MOBPQ13875 183 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 WDR43Q15061 677 aaKnown RBP eCLIP2.37□□□□□ -2.03
CLK1-208ENST00000464454 C5orf64Q2M2E5 130 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 HIKESHIQ53FT3 197 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 ZNF880Q6PDB4 577 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 PROKR2Q8NFJ6 384 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 OR9A2Q8NGT5 310 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 CIRBP-AS1Q8TBR5 109 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 ESR2Q92731 530 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 RNF5Q99942 180 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 AGMATQ9BSE5 352 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 TMEM243Q9BU79 118 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 RSPO3Q9BXY4 272 aaPredicted RBP2.37□□□□□ -2.03
CLK1-208ENST00000464454 TOLLIPQ9H0E2 274 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 RGCCQ9H4X1 137 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 C8orf17Q9NRJ1 99 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 RHBDL2Q9NX52 303 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 ZNF835Q9Y2P0 537 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 RHBDD3Q9Y3P4 386 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 UBIAD1Q9Y5Z9 338 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 TUBGCP6Q96RT7 1819 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 DOCK8Q8NF50 2099 aa2.37□□□□□ -2.03
CLK1-208ENST00000464454 A0A1W2PQ67 120 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 C5orf63A6NC05 138 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 SERPINE3A8MV23 424 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 TRDMT1O14717 391 aaKnown RBP2.36□□□□□ -2.03
CLK1-208ENST00000464454 SLC16A7O60669 478 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 MPDU1O75352 247 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 RCBTB2O95199 551 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 IGHV3-11P01762 117 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 ME2P23368 584 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 NDUFA8P51970 172 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 DAOAP59103 153 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 PITPNAQ00169 270 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 KDSRQ06136 332 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 ZNF816Q0VGE8 651 aaPredicted RBP2.36□□□□□ -2.03
CLK1-208ENST00000464454 CDC20Q12834 499 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 YIF1BQ5BJH7 314 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 RNASE13Q5GAN3 156 aaKnown RBP2.36□□□□□ -2.03
CLK1-208ENST00000464454 RTL4Q6ZR62 310 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 MRPL21Q7Z2W9 205 aaKnown RBP2.36□□□□□ -2.03
CLK1-208ENST00000464454 MDP1Q86V88 176 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 KIF2BQ8N4N8 673 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 ZNF709Q8N972 641 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 C19orf18Q8NEA5 215 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 TTLQ8NG68 377 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 OR1J4Q8NGS1 313 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 OR52P1PQ8NH57 321 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 PIH1D2Q8WWB5 315 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 ASZ1Q8WWH4 475 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 RERGQ96A58 199 aaPredicted RBP2.36□□□□□ -2.03
CLK1-208ENST00000464454 ISOC2Q96AB3 205 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 SLC25A46Q96AG3 418 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 CERS2Q96G23 380 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 IL22Q9GZX6 179 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 DYRK4Q9NR20 520 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms