RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 CAPN7Q9Y6W3 813 aa14.23□□□□□ -0.13
HMGN1-210ENST00000464078 TRBV4-1A0A0J9YWV2 114 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 BTBD17A6NE02 478 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 RENP00797 406 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 GYPAP02724 150 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 TROVE2P10155 538 aaKnown RBP eCLIP14.22□□□□□ -0.13
HMGN1-210ENST00000464078 RHCEP18577 417 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 TGFBR2P37173 567 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 MZT1Q08AG7 82 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 RFX4Q33E94 735 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 SNAI3Q3KNW1 292 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 GALNT4Q8N4A0 578 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 LY6G5BQ8NDX9 201 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 SPTSSAQ969W0 71 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 RASSF4Q9H2L5 321 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 OPA3Q9H6K4 179 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 CNTD2Q9H8S5 307 aa14.22□□□□□ -0.13
HMGN1-210ENST00000464078 SRA1Q9HD15 236 aaKnown RBP14.22□□□□□ -0.13
HMGN1-210ENST00000464078 RPRD1BQ9NQG5 326 aaKnown RBP14.22□□□□□ -0.13
HMGN1-210ENST00000464078 MRPL22Q9NWU5 206 aaKnown RBP14.22□□□□□ -0.13
HMGN1-210ENST00000464078 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.21□□□□□ -0.13
HMGN1-210ENST00000464078 GSTA4O15217 222 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 CSF1P09603 554 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 MUC1P15941 1255 aaPredicted RBP14.21□□□□□ -0.13
HMGN1-210ENST00000464078 SLC6A6P31641 620 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 GSK3BP49841 420 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 SLC7A2P52569 658 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 GUCA2AQ02747 115 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 BEAN1Q3B7T3 259 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 DRAM2Q6UX65 266 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 ZNF826PQ6ZT77 177 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 OR2AE1Q8NHA4 323 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 ST8SIA4Q92187 359 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 OR52D1Q9H346 318 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 C14orf119Q9NWQ9 140 aa14.21□□□□□ -0.13
HMGN1-210ENST00000464078 FAM32AQ9Y421 112 aaKnown RBP14.21□□□□□ -0.13
HMGN1-210ENST00000464078 PLXNB1O43157 2135 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 ZNF816-ZNF321PA0A0X1KG74 233 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 OR6C68A6NDL8 312 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 GGT3PA6NGU5 568 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 A6NLC8 198 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 BHLHE40O14503 412 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 GPR37O15354 613 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 HIST1H1CP16403 213 aaKnown RBP14.2□□□□□ -0.14
HMGN1-210ENST00000464078 ANOS1P23352 680 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 EGR3Q06889 387 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 DBPQ10586 325 aaPredicted RBP14.2□□□□□ -0.14
HMGN1-210ENST00000464078 GLYATL3Q5SZD4 288 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 C8orf82Q6P1X6 216 aaPredicted RBP14.2□□□□□ -0.14
HMGN1-210ENST00000464078 PDZD9Q8IXQ8 264 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 CMTM4Q8IZR5 234 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 OR4K13Q8NH42 304 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 OR5R1Q8NH85 324 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 RP9Q8TA86 221 aaKnown RBP14.2□□□□□ -0.14
HMGN1-210ENST00000464078 C7orf34Q96L11 122 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 RNPEPL1Q9HAU8 725 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 FBLN5Q9UBX5 448 aa14.2□□□□□ -0.14
HMGN1-210ENST00000464078 hCG_1807616A0A1W2PRN6 198 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 IDH3BO43837 385 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 HLA-DQA2P01906 255 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 OPN1MWP04001 364 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 OPN1MW2P0DN77 364 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 OPN1MW3P0DN78 364 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 PCK2Q16822 640 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 SAMD5Q5TGI4 173 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 CGB2Q6NT52 195 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 OR56B2PQ8NGI1 322 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 FAM162AQ96A26 154 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 C12orf43Q96C57 262 aaKnown RBP14.19□□□□□ -0.14
HMGN1-210ENST00000464078 HOPXQ9BPY8 73 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-210ENST00000464078 SEMA6AQ9H2E6 1030 aa14.19□□□□□ -0.14
HMGN1-210ENST00000464078 RNASEK-C17orf49H0YIS7 233 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.18□□□□□ -0.14
HMGN1-210ENST00000464078 NDUFAB1O14561 156 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 GRPP07492 148 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 EEF1B2P24534 225 aaKnown RBP14.18□□□□□ -0.14
HMGN1-210ENST00000464078 GRK5P34947 590 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 DDOSTP39656 456 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 MICBQ29980 383 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 WDR38Q5JTN6 314 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 HIST2H2BDQ6DRA6 164 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 SLC36A1Q7Z2H8 476 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 FGFRL1Q8N441 504 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 OR4C15Q8NGM1 316 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 C8orf46Q8TAG6 207 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 SPSB4Q96A44 273 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 IFT27Q9BW83 186 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 FN3KQ9H479 309 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 FGFR1OP2Q9NVK5 253 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 ONECUT1Q9UBC0 465 aa14.18□□□□□ -0.14
HMGN1-210ENST00000464078 PRPF19Q9UMS4 504 aaKnown RBP14.18□□□□□ -0.14
HMGN1-210ENST00000464078 IGHV3OR15-7A0A075B7D8 119 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 A0A1B0GW55 424 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 G3V4G9 280 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 NPFFO15130 113 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 XRCC2O43543 280 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 DUX4L2P0CJ85 424 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 DUX4L3P0CJ86 424 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 DUX4L4P0CJ87 422 aa14.17□□□□□ -0.14
HMGN1-210ENST00000464078 DUX4L5P0CJ88 424 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms