RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 RIIAD1A6NNX1 92 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 PLATP00750 562 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 GYPBP06028 91 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 ZNF3P17036 446 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 GRK5P34947 590 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 SLC15A1P46059 708 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 PITPNBP48739 271 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 GRB2P62993 217 aaKnown RBP17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 MPPED2Q15777 294 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 PRAMEF6Q5VXH4 476 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 RBMS3Q6XE24 437 aaKnown RBP17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 SIGLECL1Q8N7X8 197 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 NIPSNAP1Q9BPW8 284 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 ADAT1Q9BUB4 502 aaKnown RBP17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 RNF7Q9UBF6 113 aa17.14■□□□□ 0.33
PDLIM4-205ENST00000463615 DHRS12A0PJE2 317 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 GGT3PA6NGU5 568 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 AQP12BA6NM10 295 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 CLDN34H7C241 214 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 TNFRSF13BO14836 293 aaPredicted RBP17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 CLUP10909 449 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 PRTN3P24158 256 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 NPY4RP50391 375 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 PRKXP51817 358 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 KCNJ8Q15842 424 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 WDR25Q64LD2 544 aaPredicted RBP17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 PRSS45Q7RTY3 260 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 AQP12AQ8IXF9 295 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 ADGRG5Q8IZF4 528 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 GIPC3Q8TF64 312 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 RNF133Q8WVZ7 376 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 ZMYND19Q96E35 227 aaPredicted RBP17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 FEVQ99581 238 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 CHID1Q9BWS9 393 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 SP140LQ9H930 580 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 TRIM36Q9NQ86 728 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 CENPMQ9NSP4 180 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 CLN8Q9UBY8 286 aa17.13■□□□□ 0.33
PDLIM4-205ENST00000463615 LGALS8O00214 317 aa17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 APOC1P02654 83 aa17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 MZT1Q08AG7 82 aa17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 TAF13Q15543 124 aa17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 LYPD2Q6UXB3 125 aa17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 OR56B2PQ8NGI1 322 aa17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 OR6K6Q8NGW6 343 aa17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 TEX47Q8TBZ9 253 aa17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 LRGUKQ96M69 825 aa17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 C1orf147Q96MC9 270 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 ZNF48Q96MX3 618 aaPredicted RBP17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 UFSP2Q9NUQ7 469 aa17.12■□□□□ 0.33
PDLIM4-205ENST00000463615 NDUFA2O43678 99 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 GLCEO94923 617 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 CST1P01037 141 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 HKR1P10072 659 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 C11orf91Q3C1V1 193 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 SHFQ7M4L6 423 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 DPY19L4Q7Z388 723 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 TIGD4Q8IY51 512 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 BCL6BQ8N143 479 aaPredicted RBP17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 PARP8Q8N3A8 854 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 INTS14Q96SY0 518 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 NUDT16L1Q9BRJ7 211 aaKnown RBP17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 ABHD6Q9BV23 337 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 PRDM13Q9H4Q3 707 aa17.11■□□□□ 0.33
PDLIM4-205ENST00000463615 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 LHBP01229 141 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 IGHV4-38-2P0DP08 117 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 SLC2A1P11166 492 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 GSTT1P30711 240 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 BPIFB3P59826 476 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 FAM3AP98173 230 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 EIF2B1Q14232 305 aaKnown RBP17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 AWAT1Q58HT5 328 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 C3orf56Q8N813 242 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 OR52H1Q8NGJ2 320 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 SGK3Q96BR1 496 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 CCDC124Q96CT7 223 aaKnown RBP17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 CLPTM1LQ96KA5 538 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 MS4A7Q9GZW8 240 aaPredicted RBP17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 C14orf119Q9NWQ9 140 aa17.1■□□□□ 0.33
PDLIM4-205ENST00000463615 TRAV38-1A0A0B4J264 116 aa17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 DNAJC9-AS1A6NH13 148 aa17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 RNASE1P07998 156 aaKnown RBP17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 CFL1P23528 166 aaKnown RBP17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 OPRL1P41146 370 aa17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 MTNR1AP48039 350 aa17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 CX3CR1P49238 355 aa17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 FOXL1Q12952 345 aa17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 CD276Q5ZPR3 534 aa17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 SLC16A9Q7RTY1 509 aa17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 CANT1Q8WVQ1 401 aa17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 RGCCQ9H4X1 137 aa17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 CTSZQ9UBR2 303 aa17.09■□□□□ 0.33
PDLIM4-205ENST00000463615 hCG_38984A0A1B0GV85 526 aa17.08■□□□□ 0.32
PDLIM4-205ENST00000463615 OOEPA6NGQ2 149 aa17.08■□□□□ 0.32
PDLIM4-205ENST00000463615 FAM183AA6NL82 134 aa17.08■□□□□ 0.32
PDLIM4-205ENST00000463615 C22orf46C9J442 243 aa17.08■□□□□ 0.32
PDLIM4-205ENST00000463615 H3BN98 237 aa17.08■□□□□ 0.32
PDLIM4-205ENST00000463615 ENSAO43768 121 aaKnown RBP17.08■□□□□ 0.32
PDLIM4-205ENST00000463615 LIPFP07098 398 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms