RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 A0A0U1RQV5 110 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 LOC390937A0A1W2PQ73 354 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 EFCAB10A6NFE3 127 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 ZSCAN5BA6NJL1 495 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 CD300LBA8K4G0 201 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 PRR32B1ATL7 298 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 J3QRE1 110 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 NDUFS8O00217 210 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 RPP14O95059 124 aaKnown RBP16.87■□□□□ 0.29
COL9A3-204ENST00000463487 IGHV1-46P01743 117 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 IGHA1P01876 353 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 MYL12AP19105 171 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 DCKP27707 260 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 CCL8P80075 99 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 MRPS11P82912 194 aaKnown RBP16.87■□□□□ 0.29
COL9A3-204ENST00000463487 TNFAIP6P98066 277 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-204ENST00000463487 ZNF85Q03923 595 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 GALEQ14376 348 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 CARTPTQ16568 116 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 TSTQ16762 297 aaKnown RBP16.87■□□□□ 0.29
COL9A3-204ENST00000463487 LIPNQ5VXI9 398 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 TGIF2LYQ8IUE0 185 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 ZNF525Q8N782 197 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 ZNF540Q8NDQ6 660 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 CSNK2A3Q8NEV1 391 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 HAVCR2Q8TDQ0 301 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 RDH5Q92781 318 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 SGK3Q96BR1 496 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 ELMOD3Q96FG2 381 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 Q9H521 79 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 MRPL15Q9P015 296 aaKnown RBP16.87■□□□□ 0.29
COL9A3-204ENST00000463487 CSMD1Q96PZ7 3565 aa16.87■□□□□ 0.29
COL9A3-204ENST00000463487 ANKRD30BLA7E2S9 258 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 FAM20BO75063 409 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 MTRF1O75570 445 aaKnown RBP16.86■□□□□ 0.29
COL9A3-204ENST00000463487 CD55P08174 381 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 TNFRSF1AP19438 455 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 MAGEB1P43366 347 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 MZT1Q08AG7 82 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 MRPL28Q13084 256 aaKnown RBP16.86■□□□□ 0.29
COL9A3-204ENST00000463487 CDONQ4KMG0 1287 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 TMEM255AQ5JRV8 349 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 KLBQ86Z14 1044 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 WFDC11Q8NEX6 87 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 OR52I1Q8NGK6 324 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 SLC30A2Q9BRI3 323 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 PIMREGQ9BSJ6 248 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 ALG8Q9BVK2 526 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 ANKRD60Q9BZ19 345 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 FGF20Q9NP95 211 aaPredicted RBP16.86■□□□□ 0.29
COL9A3-204ENST00000463487 DLL4Q9NR61 685 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 CNOT2Q9NZN8 540 aaKnown RBP16.86■□□□□ 0.29
COL9A3-204ENST00000463487 OR52A1Q9UKL2 312 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 TEX15Q9BXT5 2789 aa16.86■□□□□ 0.29
COL9A3-204ENST00000463487 MAST4O15021 2626 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.85■□□□□ 0.29
COL9A3-204ENST00000463487 hCG_38984A0A1B0GV85 526 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 ATP6V1B1P15313 513 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 GNALP38405 381 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 SRP9P49458 86 aaKnown RBP16.85■□□□□ 0.29
COL9A3-204ENST00000463487 GSK3AP49840 483 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 FAM3AP98173 230 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 TP53I3Q53FA7 332 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 ZNF684Q5T5D7 378 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 TMPRSS11AQ6ZMR5 421 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 KRTAP1-3Q8IUG1 177 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 SYS1Q8N2H4 156 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 ZNF786Q8N393 782 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 OR56B2PQ8NGI1 322 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 FBLIM1Q8WUP2 373 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 GTF3AQ92664 365 aaKnown RBP16.85■□□□□ 0.29
COL9A3-204ENST00000463487 SIGLEC11Q96RL6 698 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 JAM3Q9BX67 310 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 RASSF4Q9H2L5 321 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 ABCB9Q9NP78 766 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 ERVK13-1Q9NX77 482 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 IL19Q9UHD0 177 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 RAB26Q9ULW5 256 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 MYRFQ9Y2G1 1151 aa16.85■□□□□ 0.29
COL9A3-204ENST00000463487 IGHV1-69-2A0A0G2JMI3 117 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 C5orf63A6NC05 138 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 J3QLW9 94 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 MAGEB4O15481 346 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-204ENST00000463487 GMDSO60547 372 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 LY6HO94772 140 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 HPXP02790 462 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 PIPP12273 146 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-204ENST00000463487 SLC25A16P16260 332 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 ZNF19P17023 458 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 ACHEP22303 614 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 MYF6P23409 242 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 MAP2K3P46734 347 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 MFGE8Q08431 387 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-204ENST00000463487 OR8G1Q15617 311 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 LHFPL3Q86UP9 236 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 SPERTQ8NA61 448 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 TMEM80Q96HE8 168 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 CHODLQ9H9P2 273 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 PLCXD1Q9NUJ7 323 aa16.84■□□□□ 0.29
COL9A3-204ENST00000463487 ACOXLQ9NUZ1 547 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms