RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ZNF593O00488 134 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 EBAG9O00559 213 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 TPD52L2O43399 206 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 PRKYO43930 277 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 TIMM8AO60220 97 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 SELENOFO60613 162 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 HMGN1P05114 100 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 CD55P08174 381 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 PRR23D2P0DMB1 279 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 RAC2P15153 192 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 ZNF12P17014 697 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 TUBG1P23258 451 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 PRTN3P24158 256 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 GSTT1P30711 240 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 GCH1P30793 250 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 ESRRGP62508 458 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 EFNB1P98172 346 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 FOXL1Q12952 345 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 ECH1Q13011 328 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 HLXQ14774 488 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 PTGES3Q15185 160 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 SNAI3Q3KNW1 292 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 SLX4IPQ5VYV7 408 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 C12orf73Q69YU5 71 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 ARL9Q6T311 187 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 DPY19L4Q7Z388 723 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 ERI1Q8IV48 349 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 BCL6BQ8N143 479 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 OR6N2Q8NGY6 317 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 OR2AJ1Q8NGZ0 328 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 RNF133Q8WVZ7 376 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 CCL17Q92583 94 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 APOBEC3DQ96AK3 386 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 HAVCR1Q96D42 359 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 CMBLQ96DG6 245 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 SLAMF6Q96DU3 332 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 ZNF799Q96GE5 643 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 CENPNQ96H22 339 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 COG8Q96MW5 612 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 SIGLEC11Q96RL6 698 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 INTS14Q96SY0 518 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 CIB1Q99828 191 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 PKP2Q99959 881 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 GABARAPL3Q9BY60 117 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 OR51V1Q9H2C8 321 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 MSL2Q9HCI7 577 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 TUBG2Q9NRH3 451 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 KRT84Q9NSB2 600 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 UBAP1Q9NZ09 502 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 CGGBP1Q9UFW8 167 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 OAZ3Q9UMX2 235 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 KLHDC2Q9Y2U9 406 aa6.65□□□□□ -1.34
CDC42BPA-210ENST00000462553 PRR32B1ATL7 298 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZNF878C9JN71 531 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 MLNRO43193 412 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 PRODHO43272 600 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 FOXH1O75593 365 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 MT-ND5P03915 603 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 RNASE1P07998 156 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 FPR2P25090 351 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 POLR2IP36954 125 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 OPRL1P41146 370 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 NAA10P41227 235 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 BLVRAP53004 296 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZNF92Q03936 586 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZNF154Q13106 437 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 APOFQ13790 326 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 EIF2B1Q14232 305 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 GK2Q14410 553 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 SNAPC1Q16533 368 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 MOGQ16653 247 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 ARMCX4Q5H9R4 360 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 SLC35D3Q5M8T2 416 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR2T2Q6IF00 324 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 PRSS45Q7RTY3 260 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 BCDIN3DQ7Z5W3 292 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZDHHC13Q8IUH4 622 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR5AS1Q8N127 324 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 OR2AE1Q8NHA4 323 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 OTOSQ8NHW6 89 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 DACT3Q96B18 629 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 OTULINQ96BN8 352 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 COPS4Q9BT78 406 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 ABHD6Q9BV23 337 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 CDADC1Q9BWV3 514 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 OSBPL10Q9BXB5 764 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 UNKLQ9H9P5 680 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 ZMAT3Q9HA38 289 aaKnown RBP6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 CYSLTR2Q9NS75 346 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 TVP23BQ9NYZ1 205 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 NUP50Q9UKX7 468 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 NPTNQ9Y639 398 aa6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 SOX21Q9Y651 276 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-210ENST00000462553 PLSCR5A0PG75 271 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 H0YL77 283 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 CLDN34H7C241 214 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 IGHA1P01876 353 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 LCATP04180 440 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 ALPLP05186 524 aa6.63□□□□□ -1.35
CDC42BPA-210ENST00000462553 IGHV4-38-2P0DP08 117 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms