RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SCCPDHQ8NBX0 429 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 OR8S1Q8NH09 359 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 MAP6Q96JE9 813 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 CHIAQ9BZP6 476 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 SP140LQ9H930 580 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 ACOXLQ9NUZ1 547 aa12.78□□□□□ -0.36
SKA3-204ENST00000462482 CLPSL1A2RUU4 121 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 ANKRD30BLA7E2S9 258 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 TIMM23O14925 209 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.37
SKA3-204ENST00000462482 MELTFP08582 738 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 RRM2P31350 389 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 FMO3P31513 532 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 PYCR1P32322 319 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 DDOSTP39656 456 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 GSSP48637 474 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 GLYATL3Q5SZD4 288 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 LINC00471Q8N535 108 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 OR2AE1Q8NHA4 323 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 WFDC12Q8WWY7 111 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 DYRK2Q92630 601 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 CENPMQ9NSP4 180 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 MRPL22Q9NWU5 206 aaKnown RBP12.77□□□□□ -0.37
SKA3-204ENST00000462482 C1RLQ9NZP8 487 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 CTSZQ9UBR2 303 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 FAM96BQ9Y3D0 163 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 CDH10Q9Y6N8 788 aa12.77□□□□□ -0.37
SKA3-204ENST00000462482 ARHGAP32A7KAX9 2087 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 IGHV1-69DA0A0B4J2H0 117 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 CENPVL3A0A0U1RRI6 287 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 TVP23AA6NH52 213 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 XRCC2O43543 280 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 KRT36O76013 467 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 IGHV1-69P01742 117 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 GYPAP02724 150 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 SPARCP09486 303 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 SLC15A1P46059 708 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 PRKXP51817 358 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 ARF6P62330 175 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 DBPQ10586 325 aaPredicted RBP12.76□□□□□ -0.37
SKA3-204ENST00000462482 SNAI3Q3KNW1 292 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 SAMD4BQ5PRF9 694 aaKnown RBP12.76□□□□□ -0.37
SKA3-204ENST00000462482 DCXRQ7Z4W1 244 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 CYB561A3Q8NBI2 242 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 OR56B2PQ8NGI1 322 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 LHX4Q969G2 390 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 TBX15Q96SF7 602 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 KCNJ15Q99712 375 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 ELAC2Q9BQ52 826 aaKnown RBP12.76□□□□□ -0.37
SKA3-204ENST00000462482 DPAGT1Q9H3H5 408 aa12.76□□□□□ -0.37
SKA3-204ENST00000462482 CAB39Q9Y376 341 aaPredicted RBP12.76□□□□□ -0.37
SKA3-204ENST00000462482 BTBD17A6NE02 478 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 DVL1O14640 695 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 TBX1O43435 398 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 APOC1P02654 83 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 HSD17B1P14061 328 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 MMP9P14780 707 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 RPS27P42677 84 aaKnown RBP12.75□□□□□ -0.37
SKA3-204ENST00000462482 ENTPD1P49961 510 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 BLVRAP53004 296 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 OCLNQ16625 522 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 MICBQ29980 383 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 PGBD2Q6P3X8 592 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 BTN2A1Q7KYR7 527 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 ZDHHC21Q8IVQ6 265 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 CMTM4Q8IZR5 234 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 LRTOMTQ8WZ04 291 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 ST8SIA4Q92187 359 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 UBE2FQ969M7 185 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 SLAMF6Q96DU3 332 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 RASSF4Q9H2L5 321 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 EGLN3Q9H6Z9 239 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 CNTD2Q9H8S5 307 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 IL1RAPQ9NPH3 570 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 MED4Q9NPJ6 270 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 TBC1D23Q9NUY8 699 aa12.75□□□□□ -0.37
SKA3-204ENST00000462482 ZNF878C9JN71 531 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 TNFRSF11BO00300 401 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 ARPC2O15144 300 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 IFNGP01579 166 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 SEMG1P04279 462 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 ANXA2P07355 339 aaKnown RBP12.74□□□□□ -0.37
SKA3-204ENST00000462482 CFL1P23528 166 aaKnown RBP12.74□□□□□ -0.37
SKA3-204ENST00000462482 HSD11B1P28845 292 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 OTX1P32242 354 aaPredicted RBP12.74□□□□□ -0.37
SKA3-204ENST00000462482 GNALP38405 381 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 NAA10P41227 235 aaPredicted RBP12.74□□□□□ -0.37
SKA3-204ENST00000462482 GRB2P62993 217 aaKnown RBP12.74□□□□□ -0.37
SKA3-204ENST00000462482 SNCBQ16143 134 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 TIGD6Q17RP2 521 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 GDPGP1Q6ZNW5 385 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 ZNF826PQ6ZT77 177 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 SLC36A1Q7Z2H8 476 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 DPY19L4Q7Z388 723 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 OR51L1Q8NGJ5 315 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 FAM107BQ9H098 131 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 SIRPDQ9H106 197 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 MYLK2Q9H1R3 596 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 MMP27Q9H306 513 aa12.74□□□□□ -0.37
SKA3-204ENST00000462482 RNPEPL1Q9HAU8 725 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms