RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 RAB40AQ8WXH6 277 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 SPSB4Q96A44 273 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 DACT3Q96B18 629 aaPredicted RBP15.83■□□□□ 0.12
VARS-220ENST00000461874 OR8B2Q96RD0 313 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 ADAT1Q9BUB4 502 aaKnown RBP15.83■□□□□ 0.12
VARS-220ENST00000461874 MED20Q9H944 212 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 FN3KRPQ9HA64 309 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 ZNF69Q9UC07 566 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 N6AMT1Q9Y5N5 214 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 IGHV2-70DA0A0C4DH43 119 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 TMEM89A2RUT3 159 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 FAM183AA6NL82 134 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 H3BN98 237 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 PPIAL4GP0DN37 164 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 PITPNBP48739 271 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 GRB2P62993 217 aaKnown RBP15.82■□□□□ 0.12
VARS-220ENST00000461874 EIF2B1Q14232 305 aaKnown RBP15.82■□□□□ 0.12
VARS-220ENST00000461874 BTNL3Q6UXE8 466 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 LRRN1Q6UXK5 716 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 DCDC5Q6ZRR9 648 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 DPY19L4Q7Z388 723 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 TMEM179BQ7Z7N9 219 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 OR56B2PQ8NGI1 322 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 GCDHQ92947 438 aaPredicted RBP15.82■□□□□ 0.12
VARS-220ENST00000461874 INTS14Q96SY0 518 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 OPA3Q9H6K4 179 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 RNF7Q9UBF6 113 aa15.82■□□□□ 0.12
VARS-220ENST00000461874 XRCC2O43543 280 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 HOXB6P17509 224 aaKnown RBP15.81■□□□□ 0.12
VARS-220ENST00000461874 CFPP27918 469 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 GSTT1P30711 240 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 UBA52P62987 128 aaKnown RBP15.81■□□□□ 0.12
VARS-220ENST00000461874 LYPD2Q6UXB3 125 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 RBMS3Q6XE24 437 aaKnown RBP15.81■□□□□ 0.12
VARS-220ENST00000461874 ERI1Q8IV48 349 aaKnown RBP15.81■□□□□ 0.12
VARS-220ENST00000461874 BCL6BQ8N143 479 aaPredicted RBP15.81■□□□□ 0.12
VARS-220ENST00000461874 SIGLECL1Q8N7X8 197 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 SPERTQ8NA61 448 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 C19orf18Q8NEA5 215 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 OR6N2Q8NGY6 317 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 RNF133Q8WVZ7 376 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 ABHD6Q9BV23 337 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 TOR3AQ9H497 397 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 MARCH7Q9H992 704 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 PDP1Q9P0J1 537 aaPredicted RBP15.81■□□□□ 0.12
VARS-220ENST00000461874 CLN8Q9UBY8 286 aa15.81■□□□□ 0.12
VARS-220ENST00000461874 KIR2DS1A0A191URI9 304 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 DYNC1I1O14576 645 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 GNGT2O14610 69 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 GLCEO94923 617 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 POU1F1P28069 291 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 DDOSTP39656 456 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 PSMB10P40306 273 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 CX3CR1P49238 355 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 HOXA4Q00056 320 aaPredicted RBP15.8■□□□□ 0.12
VARS-220ENST00000461874 WDR25Q64LD2 544 aaPredicted RBP15.8■□□□□ 0.12
VARS-220ENST00000461874 ZNF841Q6ZN19 808 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 DOK3Q7L591 496 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 PRSS45Q7RTY3 260 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 TRPM8Q7Z2W7 1104 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 OTULINQ96BN8 352 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 SGK3Q96BR1 496 aa15.8■□□□□ 0.12
VARS-220ENST00000461874 LGALS8O00214 317 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 PHYHO14832 338 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 TBX1O43435 398 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 APOC1P02654 83 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 ANXA2P07355 339 aaKnown RBP15.79■□□□□ 0.12
VARS-220ENST00000461874 PAICSP22234 425 aaKnown RBP15.79■□□□□ 0.12
VARS-220ENST00000461874 HSD11B1P28845 292 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 FAM3AP98173 230 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 MZT1Q08AG7 82 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 GINS1Q14691 196 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 RHOUQ7L0Q8 258 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 SHFQ7M4L6 423 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 SLC16A9Q7RTY1 509 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 TIGD4Q8IY51 512 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 UPRTQ96BW1 309 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 AMELYQ99218 206 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 OR51V1Q9H2C8 321 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 SP140LQ9H930 580 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 C1orf123Q9NWV4 160 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 DOCK11Q5JSL3 2073 aa15.79■□□□□ 0.12
VARS-220ENST00000461874 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.78■□□□□ 0.12
VARS-220ENST00000461874 ANKRD30BLA7E2S9 258 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 GYG2O15488 501 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 E2F6O75461 281 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 GRPP07492 148 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 IGHV4-38-2P0DP08 117 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 OSMP13725 252 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 OPRL1P41146 370 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 KCNJ8Q15842 424 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 TIGD6Q17RP2 521 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 SFRP4Q6FHJ7 346 aaPredicted RBP15.78■□□□□ 0.12
VARS-220ENST00000461874 PLBD1Q6P4A8 553 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 HS3ST5Q8IZT8 346 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 BOLLQ8N9W6 283 aaKnown RBP15.78■□□□□ 0.12
VARS-220ENST00000461874 OR52H1Q8NGJ2 320 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 ZMYND19Q96E35 227 aaPredicted RBP15.78■□□□□ 0.12
VARS-220ENST00000461874 REEP6Q96HR9 211 aa15.78■□□□□ 0.12
VARS-220ENST00000461874 ZNF48Q96MX3 618 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms