RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 HOXB6P17509 224 aaKnown RBP11.67□□□□□ -0.54
USP4-206ENST00000461553 CX3CR1P49238 355 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 MZT1Q08AG7 82 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 KCNJ8Q15842 424 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 TIGD6Q17RP2 521 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 TEX30Q5JUR7 227 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 LRRN1Q6UXK5 716 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 CD300LDQ6UXZ3 194 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 ADGRG5Q8IZF4 528 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 IQCF1Q8N6M8 205 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 DVL3Q92997 716 aaPredicted RBP11.67□□□□□ -0.54
USP4-206ENST00000461553 FEVQ99581 238 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 THTPAQ9BU02 230 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 CHID1Q9BWS9 393 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 MMADHCQ9H3L0 296 aaPredicted RBP11.67□□□□□ -0.54
USP4-206ENST00000461553 TOR3AQ9H497 397 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 CLN8Q9UBY8 286 aa11.67□□□□□ -0.54
USP4-206ENST00000461553 TRAV40A0A0B4J280 105 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 FAM183AA6NL82 134 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 A6NLC8 198 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 AQP12BA6NM10 295 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 ANKRD30BLA7E2S9 258 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 PHYHO14832 338 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 APOC1P02654 83 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 ANOS1P23352 680 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 GSTT1P30711 240 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 PMELP40967 661 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 UBA52P62987 128 aaKnown RBP11.66□□□□□ -0.54
USP4-206ENST00000461553 MPPED2Q15777 294 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 DNAL1Q4LDG9 190 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 LINC01590Q5TEZ4 76 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 AQP12AQ8IXF9 295 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 PARP8Q8N3A8 854 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 SIGLECL1Q8N7X8 197 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 ZDHHC22Q8N966 263 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 SPERTQ8NA61 448 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 MS4A7Q9GZW8 240 aaPredicted RBP11.66□□□□□ -0.54
USP4-206ENST00000461553 SP140LQ9H930 580 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 MED20Q9H944 212 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 ZMAT3Q9HA38 289 aaKnown RBP11.66□□□□□ -0.54
USP4-206ENST00000461553 ZNF556Q9HAH1 456 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 ESM1Q9NQ30 184 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 TRIM36Q9NQ86 728 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 TAS2R1Q9NYW7 299 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 PDP1Q9P0J1 537 aaPredicted RBP11.66□□□□□ -0.54
USP4-206ENST00000461553 RNF7Q9UBF6 113 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 ZNF69Q9UC07 566 aa11.66□□□□□ -0.54
USP4-206ENST00000461553 hCG_1807616A0A1W2PRN6 198 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 TMEM89A2RUT3 159 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 ACOT8O14734 319 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 GLCEO94923 617 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 PTBP3O95758 552 aaKnown RBP11.65□□□□□ -0.54
USP4-206ENST00000461553 PPIAL4GP0DN37 164 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 CFPP27918 469 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 POU1F1P28069 291 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 COMPP49747 757 aaPredicted RBP11.65□□□□□ -0.54
USP4-206ENST00000461553 NPY4RP50391 375 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 PAX8Q06710 450 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 FLOT2Q14254 428 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 OR8B8Q15620 311 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 KLF17Q5JT82 389 aaPredicted RBP11.65□□□□□ -0.54
USP4-206ENST00000461553 DOK3Q7L591 496 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 SHFQ7M4L6 423 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 DPY19L4Q7Z388 723 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 BOLLQ8N9W6 283 aaKnown RBP11.65□□□□□ -0.54
USP4-206ENST00000461553 PLPP7Q8NBV4 271 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 C19orf18Q8NEA5 215 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 OR8S1Q8NH09 359 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 CANT1Q8WVQ1 401 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 RAB40AQ8WXH6 277 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 SPSB4Q96A44 273 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 ZMYND19Q96E35 227 aaPredicted RBP11.65□□□□□ -0.54
USP4-206ENST00000461553 REEP6Q96HR9 211 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 TECTBQ96PL2 329 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 NUDT16L1Q9BRJ7 211 aaKnown RBP11.65□□□□□ -0.54
USP4-206ENST00000461553 YY1AP1Q9H869 796 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 C14orf119Q9NWQ9 140 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 DNAJC27Q9NZQ0 273 aa11.65□□□□□ -0.54
USP4-206ENST00000461553 C5orf63A6NC05 138 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 DNAJC9-AS1A6NH13 148 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 PRR23D1E9PI22 279 aaPredicted RBP11.64□□□□□ -0.55
USP4-206ENST00000461553 LGALS8O00214 317 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 DYNC1I1O14576 645 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 GYG2O15488 501 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 ENSAO43768 121 aaKnown RBP11.64□□□□□ -0.55
USP4-206ENST00000461553 PRR23D2P0DMB1 279 aaPredicted RBP11.64□□□□□ -0.55
USP4-206ENST00000461553 CFL1P23528 166 aaKnown RBP11.64□□□□□ -0.55
USP4-206ENST00000461553 CD80P33681 288 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 DDOSTP39656 456 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 PAX2Q02962 417 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 GFOD2Q3B7J2 385 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 WDR25Q64LD2 544 aaPredicted RBP11.64□□□□□ -0.55
USP4-206ENST00000461553 FAM57BQ71RH2 274 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 SLC16A9Q7RTY1 509 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 TRPM8Q7Z2W7 1104 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 SPATA24Q86W54 205 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 C3orf56Q8N813 242 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 OR52H1Q8NGJ2 320 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 RNF133Q8WVZ7 376 aa11.64□□□□□ -0.55
USP4-206ENST00000461553 UPRTQ96BW1 309 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms