RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 METTL17Q9H7H0 456 aaPredicted RBP13.55□□□□□ -0.24
COL7A1-203ENST00000459756 MRPL15Q9P015 296 aaKnown RBP13.55□□□□□ -0.24
COL7A1-203ENST00000459756 N6AMT1Q9Y5N5 214 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 WNK2Q9Y3S1 2297 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 STAB1Q9NY15 2570 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 IGHV3-64DA0A0J9YX35 117 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 F5H0A9 414 aaPredicted RBP13.54□□□□□ -0.24
COL7A1-203ENST00000459756 TCF21O43680 179 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 CYB5R3P00387 301 aaPredicted RBP13.54□□□□□ -0.24
COL7A1-203ENST00000459756 ANXA2P07355 339 aaKnown RBP13.54□□□□□ -0.24
COL7A1-203ENST00000459756 IRF2P14316 349 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 ANOS1P23352 680 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 DDOSTP39656 456 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 OPRL1P41146 370 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 CRISP1P54107 249 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 MAB21L1Q13394 359 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 ATP6AP1Q15904 470 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 TMEM236Q5W0B7 351 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 C1orf229Q6ZS94 237 aaPredicted RBP13.54□□□□□ -0.24
COL7A1-203ENST00000459756 KLBQ86Z14 1044 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 PHC2Q8IXK0 858 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 OR52H1Q8NGJ2 320 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 OR11L1Q8NGX0 322 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 OR5K1Q8NHB7 308 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 OTOSQ8NHW6 89 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 Q8TCH9 128 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 AMELYQ99218 206 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 ADAT1Q9BUB4 502 aaKnown RBP13.54□□□□□ -0.24
COL7A1-203ENST00000459756 TMPRSS13Q9BYE2 586 aa13.54□□□□□ -0.24
COL7A1-203ENST00000459756 POLR3KQ9Y2Y1 108 aaPredicted RBP13.54□□□□□ -0.24
COL7A1-203ENST00000459756 TBX1O43435 398 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 PTBP3O95758 552 aaKnown RBP13.53□□□□□ -0.24
COL7A1-203ENST00000459756 AVPP01185 164 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 LYNP07948 512 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 H2BFMP0C1H6 154 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 FCGR1AP12314 374 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 SLC2A5P22732 501 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 CFL1P23528 166 aaKnown RBP13.53□□□□□ -0.24
COL7A1-203ENST00000459756 ZFP36P26651 326 aaKnown RBP13.53□□□□□ -0.24
COL7A1-203ENST00000459756 PMELP40967 661 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 DAPP51397 102 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 ESRRGP62508 458 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 SNAPC1Q16533 368 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 KRTAP24-1Q3LI83 254 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 PRSS45Q7RTY3 260 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 SPERTQ8NA61 448 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 PLPP7Q8NBV4 271 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 DUS3LQ96G46 650 aaKnown RBP13.53□□□□□ -0.24
COL7A1-203ENST00000459756 TMEM165Q9HC07 324 aa13.53□□□□□ -0.24
COL7A1-203ENST00000459756 LOC105371242A0A075B767 164 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 CEACAM18A8MTB9 384 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 A8MXK9 166 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 G3V2T6 193 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 SELENOFO60613 162 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 ZNF121P58317 390 aaPredicted RBP13.52□□□□□ -0.25
COL7A1-203ENST00000459756 RPS7P62081 194 aaKnown RBP13.52□□□□□ -0.25
COL7A1-203ENST00000459756 MZT1Q08AG7 82 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 PTGES3Q15185 160 aaKnown RBP13.52□□□□□ -0.25
COL7A1-203ENST00000459756 TIGD6Q17RP2 521 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 ESCO2Q56NI9 601 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 SLC16A9Q7RTY1 509 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 C1QL2Q7Z5L3 287 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.52□□□□□ -0.25
COL7A1-203ENST00000459756 BBS1Q8NFJ9 593 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 OR56B2PQ8NGI1 322 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 THEM6Q8WUY1 208 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 SGK3Q96BR1 496 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 REEP6Q96HR9 211 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 PRRG3Q9BZD7 231 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 OR10A2Q9H208 303 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 C7orf69Q9H7B7 122 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 FN3KRPQ9HA64 309 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 KRT84Q9NSB2 600 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 TVP23BQ9NYZ1 205 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 MIOXQ9UGB7 285 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 LRCH1Q9Y2L9 728 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 PPIAL4AQ9Y536 164 aa13.52□□□□□ -0.25
COL7A1-203ENST00000459756 ARHGAP32A7KAX9 2087 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 A0A0A6YYJ9 748 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.51□□□□□ -0.25
COL7A1-203ENST00000459756 SAC3D1A6NKF1 404 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 ANKRD30BLA7E2S9 258 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 H3BNX3 289 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 FAM20BO75063 409 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 ZNF205O95201 554 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 WNT2P09544 360 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 RPS2P15880 293 aaKnown RBP13.51□□□□□ -0.25
COL7A1-203ENST00000459756 NAA10P41227 235 aaPredicted RBP13.51□□□□□ -0.25
COL7A1-203ENST00000459756 SEC61A1P61619 476 aaKnown RBP13.51□□□□□ -0.25
COL7A1-203ENST00000459756 FAM3AP98173 230 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 APOFQ13790 326 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 MPPED2Q15777 294 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 ZNF404Q494X3 552 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 PRAMEF6Q5VXH4 476 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 FAM57BQ71RH2 274 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 ZDHHC13Q8IUH4 622 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 NANPQ8TBE9 248 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 STMN2Q93045 179 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 PKP2Q99959 881 aa13.51□□□□□ -0.25
COL7A1-203ENST00000459756 TMEM246Q9BRR3 403 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms