RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 ZNF121P58317 390 aaPredicted RBP16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 H3F3AP84243 136 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 ZNF273Q14593 569 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 TAF13Q15543 124 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 CDNFQ49AH0 187 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 OPN5Q6U736 354 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 RNF144BQ7Z419 303 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 ZNF584Q8IVC4 421 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 C1orf210Q8IVY1 113 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 PDZD9Q8IXQ8 264 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 OR5AS1Q8N127 324 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 ASB13Q8WXK3 278 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 NUDT16L1Q9BRJ7 211 aaKnown RBP16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 SOX7Q9BT81 388 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 PROK2Q9HC23 129 aa16.25■□□□□ 0.19
SEMA3B-209ENST00000456560 TMEM14DPA8MWL7 114 aa16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 NUPL2O15504 423 aaKnown RBP16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 KLK3P07288 261 aaPredicted RBP16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 ERCC1P07992 297 aaPredicted RBP16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 ZNF20P17024 532 aa16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 CCL1P22362 96 aa16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 GSK3AP49840 483 aa16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 MEF2DQ14814 521 aa16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 EXT1Q16394 746 aa16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 PEAR1Q5VY43 1037 aaPredicted RBP16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 STPG2Q8N412 459 aa16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 OR4S1Q8NGB4 309 aa16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 M1APQ8TC57 530 aa16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 MR1Q95460 341 aa16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 PTRH2Q9Y3E5 179 aaKnown RBP16.24■□□□□ 0.19
SEMA3B-209ENST00000456560 ABOP16442 354 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 CLDN17P56750 224 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 ZFP36L1Q07352 338 aaKnown RBP16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 TRA2AQ13595 282 aaKnown RBP eCLIP16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 TRAPPC6BQ86SZ2 158 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 ANGPTL5Q86XS5 388 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 C12orf45Q8N5I9 185 aaPredicted RBP16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 AGBL5Q8NDL9 886 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 OR52H1Q8NGJ2 320 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 SH2D2AQ9NP31 389 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 SLC2A8Q9NY64 477 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 HS3ST3B1Q9Y662 390 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 DISC1C4P0D8 188 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 SLC2A1P11166 492 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 CCL4P13236 92 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 ZNF17P17021 662 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 IL32P24001 234 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 ZNF93P35789 620 aaPredicted RBP16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 GMFBP60983 142 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 ZMYND11Q15326 602 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 HSD17B13Q7Z5P4 300 aaPredicted RBP16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 CHST4Q8NCG5 386 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 DMRTA2Q96SC8 542 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 LDAHQ9H6V9 325 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 GPR84Q9NQS5 396 aa16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 FARSAQ9Y285 508 aaKnown RBP16.23■□□□□ 0.19
SEMA3B-209ENST00000456560 TLX3O43711 291 aaPredicted RBP16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 SCGNO76038 276 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 CCL3P10147 92 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 CX3CR1P49238 355 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 MC2RQ01718 297 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 LY6G6FQ5SQ64 297 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 C11orf88Q6PI97 169 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 ABHD12BQ7Z5M8 362 aaPredicted RBP16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 OR1S1Q8NH92 325 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 FBXW5Q969U6 566 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 C1orf147Q96MC9 270 aaPredicted RBP16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 ZIC3O60481 467 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 LIFP15018 202 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 CTSSP25774 331 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 LSM6P62312 80 aaKnown RBP16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 PGAP1Q75T13 922 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 OR2W3Q7Z3T1 314 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 TMED4Q7Z7H5 227 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 OR10R2Q8NGX6 335 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 TMEM54Q969K7 222 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 GPR160Q9UJ42 338 aa16.22■□□□□ 0.19
SEMA3B-209ENST00000456560 PATE3B3GLJ2 98 aa16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 SPDEFO95238 335 aa16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 ZNF133P52736 654 aaPredicted RBP16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 GRB2P62993 217 aaKnown RBP16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 SCGB2B2Q4G0G5 96 aa16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 ZNF660Q6AZW8 331 aaPredicted RBP16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 AWAT2Q6E213 333 aa16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 GVQW1Q8N7I0 195 aa16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 PAQR8Q8TEZ7 354 aa16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 NUDCD2Q8WVJ2 157 aa16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 MRGPRFQ96AM1 343 aa16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 PRRT1Q99946 306 aa16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 ZNF416Q9BWM5 594 aa16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 VSIG4Q9Y279 399 aa16.21■□□□□ 0.19
SEMA3B-209ENST00000456560 SSX5O60225 188 aa16.21■□□□□ 0.18
SEMA3B-209ENST00000456560 ICAM2P13598 275 aa16.21■□□□□ 0.18
SEMA3B-209ENST00000456560 DUSP3P51452 185 aaPredicted RBP16.21■□□□□ 0.18
SEMA3B-209ENST00000456560 SSR4P51571 173 aa16.21■□□□□ 0.18
SEMA3B-209ENST00000456560 DSCR4P56555 118 aaPredicted RBP16.21■□□□□ 0.18
SEMA3B-209ENST00000456560 SORDQ00796 357 aa16.21■□□□□ 0.18
SEMA3B-209ENST00000456560 RNASE10Q5GAN6 216 aaKnown RBP16.21■□□□□ 0.18
SEMA3B-209ENST00000456560 PHYHD1Q5SRE7 291 aa16.21■□□□□ 0.18
SEMA3B-209ENST00000456560 C10orf128Q5T292 105 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms