RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 PLEKHA8Q96JA3 519 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 ADAT1Q9BUB4 502 aaKnown RBP17.81■□□□□ 0.44
HMGB3-205ENST00000455596 TMEM165Q9HC07 324 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 MRPL15Q9P015 296 aaKnown RBP17.81■□□□□ 0.44
HMGB3-205ENST00000455596 KIF17Q9P2E2 1029 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 LRCH1Q9Y2L9 728 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 PRODHO43272 600 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 TIPRLO75663 272 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 WNT2P09544 360 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 ADRA2CP18825 462 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 KLHL12Q53G59 568 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 PRAMEF6Q5VXH4 476 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 CPOQ8IVL8 374 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 OR56B2PQ8NGI1 322 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 Q8TCH9 128 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 ZNF418Q8TF45 676 aaPredicted RBP17.8■□□□□ 0.44
HMGB3-205ENST00000455596 SPSB4Q96A44 273 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 NTN4Q9HB63 628 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 SLC25A19Q9HC21 320 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 MIOXQ9UGB7 285 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 PPIAL4AQ9Y536 164 aa17.8■□□□□ 0.44
HMGB3-205ENST00000455596 FAM20BO75063 409 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 ATP5HO75947 161 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 H2BFMP0C1H6 154 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 RPS2P15880 293 aaKnown RBP17.79■□□□□ 0.44
HMGB3-205ENST00000455596 TIGD6Q17RP2 521 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 ZNF404Q494X3 552 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 SLC35D3Q5M8T2 416 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 TMEM236Q5W0B7 351 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 AMELYQ99218 206 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 TMEM246Q9BRR3 403 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 SSBP3Q9BWW4 388 aaPredicted RBP17.79■□□□□ 0.44
HMGB3-205ENST00000455596 FN3KRPQ9HA64 309 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 MMP26Q9NRE1 261 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 PAPOLBQ9NRJ5 636 aaKnown RBP17.79■□□□□ 0.44
HMGB3-205ENST00000455596 UFSP2Q9NUQ7 469 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 DNAJC27Q9NZQ0 273 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 OPN4Q9UHM6 478 aa17.79■□□□□ 0.44
HMGB3-205ENST00000455596 TRAPPC2LH3BP13 241 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 SELENOFO60613 162 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 LYNP07948 512 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 ZNF12P17014 697 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 DDOSTP39656 456 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 OPRL1P41146 370 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 MPPED2Q15777 294 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 FAM201AQ5SY85 155 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 KLBQ86Z14 1044 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.78■□□□□ 0.44
HMGB3-205ENST00000455596 ZNF454Q8N9F8 522 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 SPERTQ8NA61 448 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 PLPP7Q8NBV4 271 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 OR52H1Q8NGJ2 320 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 OR5K1Q8NHB7 308 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 OTOSQ8NHW6 89 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 THEM6Q8WUY1 208 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 DVL3Q92997 716 aaPredicted RBP17.78■□□□□ 0.44
HMGB3-205ENST00000455596 UTP4Q969X6 686 aaKnown RBP17.78■□□□□ 0.44
HMGB3-205ENST00000455596 NEIL1Q96FI4 390 aaPredicted RBP17.78■□□□□ 0.44
HMGB3-205ENST00000455596 OR5V1Q9UGF6 321 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 INSIG2Q9Y5U4 225 aa17.78■□□□□ 0.44
HMGB3-205ENST00000455596 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.77■□□□□ 0.44
HMGB3-205ENST00000455596 ANKRD30BLA7E2S9 258 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 VENTXO95231 258 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 PTBP3O95758 552 aaKnown RBP17.77■□□□□ 0.44
HMGB3-205ENST00000455596 CRISP1P54107 249 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 ZNF121P58317 390 aaPredicted RBP17.77■□□□□ 0.44
HMGB3-205ENST00000455596 RPS7P62081 194 aaKnown RBP17.77■□□□□ 0.44
HMGB3-205ENST00000455596 GNB2P62879 340 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 FAM3AP98173 230 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 MZT1Q08AG7 82 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 ZNF154Q13106 437 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 FAHD1Q6P587 224 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 FAM57BQ71RH2 274 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 NLRC3Q7RTR2 1065 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 SLC16A9Q7RTY1 509 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 PRSS45Q7RTY3 260 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 DEFB108BQ8NET1 73 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 SGK3Q96BR1 496 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 REEP6Q96HR9 211 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 MRI1Q9BV20 369 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 MMADHCQ9H3L0 296 aaPredicted RBP17.77■□□□□ 0.44
HMGB3-205ENST00000455596 RNF7Q9UBF6 113 aa17.77■□□□□ 0.44
HMGB3-205ENST00000455596 SLC2A5P22732 501 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 CFL1P23528 166 aaKnown RBP17.76■□□□□ 0.43
HMGB3-205ENST00000455596 DAPP51397 102 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 SNAPC1Q16533 368 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 PARP8Q8N3A8 854 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 BBS1Q8NFJ9 593 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 SEMA6DQ8NFY4 1073 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 OR8B3Q8NGG8 313 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 PGAM5Q96HS1 289 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 OR8B2Q96RD0 313 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 OR10A2Q9H208 303 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 BRD7Q9NPI1 651 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 C14orf119Q9NWQ9 140 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 TVP23BQ9NYZ1 205 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 AUP1Q9Y679 476 aa17.76■□□□□ 0.43
HMGB3-205ENST00000455596 RGS9O75916 674 aaPredicted RBP17.75■□□□□ 0.43
HMGB3-205ENST00000455596 FSHBP01225 129 aa17.75■□□□□ 0.43
HMGB3-205ENST00000455596 NAA10P41227 235 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms