RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 ERCC1P07992 297 aaPredicted RBP12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 C21orf33P30042 268 aaPredicted RBP12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 MPV17P39210 176 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 ETV1P50549 477 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 HLXQ14774 488 aaPredicted RBP12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 NKPD1Q17RQ9 610 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 PCGF3Q3KNV8 242 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 FAM209AQ5JX71 171 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 PRSS48Q7RTY5 328 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 CDH24Q86UP0 819 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 LRP11Q86VZ4 500 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 FTMTQ8N4E7 242 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 CSNK2A3Q8NEV1 391 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 OR8B12Q8NGG6 310 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 OR2G2Q8NGZ5 317 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 PELI1Q96FA3 418 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 TRMT61AQ96FX7 289 aaKnown RBP12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 DIRC2Q96SL1 478 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 GSX2Q9BZM3 304 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 LIME1Q9H400 295 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 POFUT1Q9H488 388 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 DYNLRB1Q9NP97 96 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 BRD7Q9NPI1 651 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 ZNF319Q9P2F9 582 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 ZDHHC8Q9ULC8 765 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 FZR1Q9UM11 496 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 NOP16Q9Y3C1 178 aaKnown RBP12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 N6AMT1Q9Y5N5 214 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 CCDC168Q8NDH2 2452 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 hCG_38984A0A1B0GV85 526 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 DHRS7CA6NNS2 312 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 CD300LBA8K4G0 201 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 MYL12BO14950 172 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 MTRF1O75570 445 aaKnown RBP12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 IGLV3-1P01715 115 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 TTRP02766 147 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 ADH4P08319 380 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 HTR1AP08908 422 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 UBCP0CG48 685 aaKnown RBP12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 MMP15P51511 669 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 TAS2R43P59537 309 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 FAM3AP98173 230 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 MFGE8Q08431 387 aaPredicted RBP12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 OR8B8Q15620 311 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 KRT74Q7RTS7 529 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 KLBQ86Z14 1044 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 LRRC75A-AS1Q8N1F1 130 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 ZNF485Q8NCK3 441 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 OR8G5Q8NG78 346 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 OR2AE1Q8NHA4 323 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 SPRYD4Q8WW59 207 aaPredicted RBP12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 NRGNQ92686 78 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 MND1Q9BWT6 205 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 CACNG6Q9BXT2 260 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 RAB1BQ9H0U4 201 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 ISG20L2Q9H9L3 353 aaKnown RBP12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 BARX1Q9HBU1 254 aaPredicted RBP12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 TRIM36Q9NQ86 728 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 PAK1IP1Q9NWT1 392 aaPredicted RBP12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 NKIRAS2Q9NYR9 191 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 MRPL15Q9P015 296 aaKnown RBP12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 MYEF2Q9P2K5 600 aaKnown RBP12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 CLEC2DQ9UHP7 191 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 GTF2A1LQ9UNN4 478 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 PLEKHA6Q9Y2H5 1048 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 LRCH1Q9Y2L9 728 aa12.23□□□□□ -0.45
HMGXB4-204ENST00000455359 A0A1B0GWJ7 208 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 GGT3PA6NGU5 568 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 C17orf100A8MU93 164 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 ISG15P05161 165 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 ADRA2AP08913 450 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 ZNF12P17014 697 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 CCL1P22362 96 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 EEF1B2P24534 225 aaKnown RBP12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 GSK3AP49840 483 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 WNT4P56705 351 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 BDH1Q02338 343 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 MVKQ03426 396 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 IRF3Q14653 427 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 DEFB113Q30KQ7 82 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 WDR38Q5JTN6 314 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 ZBTB37Q5TC79 503 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 TMEM244Q5VVB8 128 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 OR2T2Q6IF00 324 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 RPL22L1Q6P5R6 122 aaKnown RBP12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 Q6ZSR3 168 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 DOK3Q7L591 496 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 NANOGP1Q8N7R0 232 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 PLPP7Q8NBV4 271 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 OR13G1Q8NGZ3 307 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 NEU4Q8WWR8 484 aaPredicted RBP12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 ABCB9Q9NP78 766 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 GPR84Q9NQS5 396 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 ERVK-18Q9QC07 812 aa12.22□□□□□ -0.45
HMGXB4-204ENST00000455359 ANKRD17O75179 2603 aaKnown RBP12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 A0A1B0GVI7 797 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 C5orf63A6NC05 138 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 TMEM212A6NML5 194 aa12.21□□□□□ -0.45
HMGXB4-204ENST00000455359 PSMB10P40306 273 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms