RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 BTG1P62324 171 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 FOXC1Q12948 553 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 MALLQ13021 153 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 RSPO1Q2MKA7 263 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 ACSF3Q4G176 576 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 ZNF324BQ6AW86 544 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 FAM180AQ6UWF9 173 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 FAM57BQ71RH2 274 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 SKA3Q8IX90 412 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 SAXO1Q8IYX7 474 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 ZSCAN4Q8NAM6 433 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 SEMA6DQ8NFY4 1073 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 KCNG3Q8TAE7 436 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 OR51E1Q8TCB6 317 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 FCAMRQ8WWV6 532 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 FGGYQ96C11 551 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 FOXN4Q96NZ1 517 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 THAP7Q9BT49 309 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 PIGMQ9H3S5 423 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.97□□□□□ -1.455e-12■■■■■ 43.9
ECHDC1-210ENST00000454859 B3GNT2Q9NY97 397 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 LIPGQ9Y5X9 500 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 A0A1W2PQ09 198 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 POM121CA8CG34 1229 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 SNRPBP14678 240 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 ARSBP15848 533 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 PRKXP51817 358 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 ACTBP60709 375 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 ACTG1P63261 375 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 ZMYND11Q15326 602 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 C2orf76Q3KRA6 126 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 TMEM69Q5SWH9 247 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 CLVS2Q5SYC1 327 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 TFAP2EQ6VUC0 442 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 ASCL4Q6XD76 172 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 BEND4Q6ZU67 534 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 LHFPL2Q6ZUX7 228 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 BTLAQ7Z6A9 289 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 CMTM4Q8IZR5 234 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 RDH10Q8IZV5 341 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 GABRG1Q8N1C3 465 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 RBMXL3Q8N7X1 1067 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 OR51A4Q8NGJ6 313 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 OR10AC1Q8NH08 325 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 SYNPRQ8TBG9 265 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 TRIM63Q969Q1 353 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 ALKBH3Q96Q83 286 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 SFXN3Q9BWM7 321 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 RNF121Q9H920 327 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 TAS2R4Q9NYW5 299 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 IL36GQ9NZH8 169 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 AMDHD2Q9Y303 409 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 MED12LQ86YW9 2145 aa5.97□□□□□ -1.45
ECHDC1-210ENST00000454859 ZNF407Q9C0G0 2248 aa5.96□□□□□ -1.45
ECHDC1-210ENST00000454859 DOCK7Q96N67 2140 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 A0A1B0GTH9 108 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 GGT3PA6NGU5 568 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 DVL2O14641 736 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 AKR7A2O43488 359 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 WNT11O96014 354 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 CST4P01036 141 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 MAS1P04201 325 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 MELTFP08582 738 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 ITGA5P08648 1049 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 GSTP1P09211 210 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 B4GALT1P15291 398 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 SELEP16581 610 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 ZNF93P35789 620 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 RFC3P40938 356 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 PNLIPRP3Q17RR3 467 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 PABPC1L2AQ5JQF8 200 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 C1orf185Q5T7R7 199 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 SPATC1Q76KD6 591 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 LRRC18Q8N456 261 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 STEAP2Q8NFT2 490 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 FAM57AQ8TBR7 257 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 CREB3L1Q96BA8 519 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 SLC25A38Q96DW6 304 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 URM1Q9BTM9 101 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 CST11Q9H112 138 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 TBC1D24Q9ULP9 559 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 A0A087WV48 116 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 ZNF816-ZNF321PA0A0X1KG74 233 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 A0A1W2PPK0 400 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 DCDC2BA2VCK2 349 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 FAM90A10PA6NDY2 464 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 FAM90A18PA6NE21 464 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 FAM90A16PA6NEW6 464 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 FAM90A20PA6NIJ5 464 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 FAM90A8PA6NJQ4 464 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 FAM90A7PA6NKC0 464 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 FAM90A22PA8MWA6 464 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 FAM90A12PA8MX19 464 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 FAM90A5PA8MXJ8 464 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 FAM90A23PA8MXZ1 464 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 F5H5K5 113 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 LYRM1O43325 122 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 CTAG2O75638 210 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 TGM6O95932 706 aa5.96□□□□□ -1.46
ECHDC1-210ENST00000454859 CSF1P09603 554 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms