RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RFKQ969G6 155 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 UBE2FQ969M7 185 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 SGK3Q96BR1 496 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 REEP6Q96HR9 211 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 SIGLEC11Q96RL6 698 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 SLC22A4Q9H015 551 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 OR10A2Q9H208 303 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 SMPD3Q9NY59 655 aaPredicted RBP11.98□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF391Q9UJN7 358 aa11.98□□□□□ -0.49
HDAC4-205ENST00000454542 LRP5LA4QPB2 252 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 H0YL77 283 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 J3QRE1 110 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 TPD52L2O43399 206 aaKnown RBP11.97□□□□□ -0.49
HDAC4-205ENST00000454542 TBX1O43435 398 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 ENTPD6O75354 484 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF16P17020 682 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-205ENST00000454542 CFL1P23528 166 aaKnown RBP11.97□□□□□ -0.49
HDAC4-205ENST00000454542 IL2RGP31785 369 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 DDOSTP39656 456 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 GZMKP49863 264 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 MMP16P51512 607 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 CXCR4P61073 352 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 TIGD6Q17RP2 521 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF181Q2M3W8 571 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 HFEQ30201 348 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 KRT74Q7RTS7 529 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 SSX6Q7RTT6 188 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 CLDND2Q8NHS1 167 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 PGAM5Q96HS1 289 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 SOX7Q9BT81 388 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 MROQ9BYG7 248 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 MOB1AQ9H8S9 216 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 GCM1Q9NP62 436 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 TMEM100Q9NV29 134 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 FAM118AQ9NWS6 357 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 DCAF16Q9NXF7 216 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 NUFIP1Q9UHK0 495 aaKnown RBP11.97□□□□□ -0.49
HDAC4-205ENST00000454542 MRM2Q9UI43 246 aaKnown RBP11.97□□□□□ -0.49
HDAC4-205ENST00000454542 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.97□□□□□ -0.49
HDAC4-205ENST00000454542 NOP16Q9Y3C1 178 aaKnown RBP11.97□□□□□ -0.49
HDAC4-205ENST00000454542 WIPI2Q9Y4P8 454 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 GMPPBQ9Y5P6 360 aa11.97□□□□□ -0.49
HDAC4-205ENST00000454542 DYSFO75923 2080 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 HIVEP2P31629 2446 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 A0A0U1RQV5 110 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 LOC100130705A0A1B0GUX0 176 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 GGT3PA6NGU5 568 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF670-ZNF695F2Z2N8 137 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 PSMD9O00233 223 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 WNT9BO14905 357 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 PPIHO43447 177 aaKnown RBP11.96□□□□□ -0.49
HDAC4-205ENST00000454542 OR2T7P0C7T2 308 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 SRP9P49458 86 aaKnown RBP11.96□□□□□ -0.49
HDAC4-205ENST00000454542 RIDAP52758 137 aaKnown RBP11.96□□□□□ -0.49
HDAC4-205ENST00000454542 RIPPLY3P57055 190 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 ISL1P61371 349 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 SLC3A1Q07837 685 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 MFGE8Q08431 387 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-205ENST00000454542 HNRNPA0Q13151 305 aaKnown RBP11.96□□□□□ -0.49
HDAC4-205ENST00000454542 MAB21L1Q13394 359 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 ZNF829Q3KNS6 432 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-205ENST00000454542 OGFRL1Q5TC84 451 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-205ENST00000454542 Q71RC1 249 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-205ENST00000454542 KLBQ86Z14 1044 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-205ENST00000454542 OR2T27Q8NH04 317 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 RHOXF1Q8NHV9 184 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 Q8TCH9 128 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 APH1BQ8WW43 257 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 SPRYD4Q8WW59 207 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-205ENST00000454542 ITFG2Q969R8 447 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 LYZL4Q96KX0 146 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 ADAT1Q9BUB4 502 aaKnown RBP11.96□□□□□ -0.49
HDAC4-205ENST00000454542 TTTY10Q9BZA0 68 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 TMEM106BQ9NUM4 274 aa11.96□□□□□ -0.49
HDAC4-205ENST00000454542 F5H5P2 479 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 IFNL4K9M1U5 179 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 MPZL2O60487 215 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 APOL3O95236 402 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 IGHV2-70P01814 119 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 HLA-DPB1P04440 258 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 HOXB4P17483 251 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-205ENST00000454542 ACKR3P25106 362 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 MTNR1AP48039 350 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 GSK3AP49840 483 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 CDH15P55291 814 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 LMO4P61968 165 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 ELF3P78545 371 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-205ENST00000454542 ZNF91Q05481 1191 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 LPCAT4Q643R3 524 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 CYB5R2Q6BCY4 276 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 Q6ZSR3 168 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 MSI2Q96DH6 328 aaKnown RBP11.95□□□□□ -0.5
HDAC4-205ENST00000454542 G6PC2Q9NQR9 355 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 TMEM160Q9NX00 188 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 IKZF2Q9UKS7 526 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 R4GMQ9 66 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 SVEP1Q4LDE5 3571 aa11.95□□□□□ -0.5
HDAC4-205ENST00000454542 MALRD1Q5VYJ5 2156 aa11.94□□□□□ -0.5
HDAC4-205ENST00000454542 TMEM269A0A1B0GVZ9 245 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms