RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 NTSP30990 170 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 CNR2P34972 360 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 RRADP55042 308 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 CCL7P80098 99 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 DGUOKQ16854 277 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 C2orf68Q2NKX9 166 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 H2BFWTQ7Z2G1 175 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 MDGA2Q7Z553 956 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 TMEM179BQ7Z7N9 219 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 OR13D1Q8NGV5 346 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 LCN9Q8WX39 176 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 ZNF300Q96RE9 604 aaPredicted RBP6.87□□□□□ -1.31
BRCC3-208ENST00000453705 TBX5Q99593 518 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 ANKRD19PQ9H560 264 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 ZNF556Q9HAH1 456 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 VNN3Q9NY84 501 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 CALML5Q9NZT1 146 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 ENPP4Q9Y6X5 453 aa6.87□□□□□ -1.31
BRCC3-208ENST00000453705 TRBV11-1A0A0K0K1C0 115 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 A0A1W2PS29 197 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 B4DGG1 531 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 C4orf51C9J302 202 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 F5H768 121 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 LDB3O75112 727 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 WNT11O96014 354 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 ADRB1P08588 477 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 UGT2B7P16662 529 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 GCSHP23434 173 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 F8A1P23610 371 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 OTX1P32242 354 aaPredicted RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 TAS2R41P59536 307 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 ISL1P61371 349 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 IL13RA1P78552 427 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 IL5RAQ01344 420 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 BIKQ13323 160 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 MPPED2Q15777 294 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 SPIN3Q5JUX0 258 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 Q6ZS52 159 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 Q6ZSR3 168 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 Q6ZSR6 202 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 C8orf59Q8N0T1 100 aaPredicted RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 ACOT4Q8N9L9 421 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 ZNF555Q8NEP9 628 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 TSTD1Q8NFU3 115 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 OR6K3Q8NGY3 331 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 TM9SF4Q92544 642 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 ANKRD9Q96BM1 317 aaPredicted RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 HCAR1Q9BXC0 346 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 FAM234AQ9H0X4 552 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 TRIM36Q9NQ86 728 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 POMT2Q9UKY4 750 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 COPS3Q9UNS2 423 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 ARHGEF17Q96PE2 2063 aaPredicted RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 LOC105371242A0A075B767 164 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 LINC00862A6NCI5 91 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 A6NIZ1 184 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 SYNGR3O43761 229 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 EML2O95834 649 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 CSN3P07498 182 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 DBHP09172 617 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 DANCRP0C864 163 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 CEACAM8P31997 349 aaPredicted RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 POLR2IP36954 125 aaKnown RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 GLP1RP43220 463 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 SSR2P43308 183 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 SMIM11AP58511 58 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 IGLV3-21P80748 117 aaPredicted RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 EWSR1Q01844 656 aaKnown RBP eCLIP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 CRMP1Q14194 572 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 GRK1Q15835 563 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 CTF1Q16619 201 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 TIMM23BQ5SRD1 257 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 ATG4DQ86TL0 474 aaPredicted RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 ADGRG3Q86Y34 549 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 EIF4E3Q8N5X7 224 aaKnown RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 ZNF655Q8N720 491 aaPredicted RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 NLGN4YQ8NFZ3 816 aaPredicted RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 SYT3Q9BQG1 590 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 SRMSQ9H3Y6 488 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 GLIPR2Q9H4G4 154 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 REEP1Q9H902 201 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 CISD1Q9NZ45 108 aaKnown RBP6.86□□□□□ -1.31
BRCC3-208ENST00000453705 ORC6Q9Y5N6 252 aa6.86□□□□□ -1.31
BRCC3-208ENST00000453705 TRABD2BA6NFA1 517 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 HMGN4O00479 90 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 SLC31A1O15431 190 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 ETFAP13804 333 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 CSNK2A2P19784 350 aaPredicted RBP6.85□□□□□ -1.31
BRCC3-208ENST00000453705 RPL10P27635 214 aaKnown RBP6.85□□□□□ -1.31
BRCC3-208ENST00000453705 CYB561P49447 251 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 CRISP1P54107 249 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 RPL19P84098 196 aaKnown RBP6.85□□□□□ -1.31
BRCC3-208ENST00000453705 ZSWIM7Q19AV6 140 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 Q5BKY6 102 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 FHL5Q5TD97 284 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 C6orf120Q7Z4R8 191 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 CD163Q86VB7 1156 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 TMEM251Q8N6I4 163 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 OR7G2Q8NG99 324 aa6.85□□□□□ -1.31
BRCC3-208ENST00000453705 OR10X1Q8NGY0 326 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms