RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 GPR6P46095 362 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 UCP2P55851 309 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 EGR3Q06889 387 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 SPHARQ15513 63 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 MED22Q15528 200 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 MEP1BQ16820 701 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 TIGD6Q17RP2 521 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 CDONQ4KMG0 1287 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 PABPC1L2AQ5JQF8 200 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 ELFN2Q5R3F8 820 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 GPR141Q7Z602 305 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 RFLNBQ8N5W9 214 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 ZNF485Q8NCK3 441 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 NABP1Q96AH0 204 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 COG8Q96MW5 612 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 SOX7Q9BT81 388 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 ISYNA1Q9NPH2 558 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 SLCO1C1Q9NYB5 712 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 KLHDC2Q9Y2U9 406 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 PHF1O43189 567 aaPredicted RBP15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 MPZL1O95297 269 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 MT-ND5P03915 603 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 ZNF32P17041 273 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 ACHEP22303 614 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 COL8A2P25067 703 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 STOMP27105 288 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 IL2RGP31785 369 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 GP2P55259 537 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 ERVS71-1P61550 626 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 BDH1Q02338 343 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 ACSM1Q08AH1 577 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 MLLT11Q13015 90 aaPredicted RBP15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 MOGQ16653 247 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 OR2G6Q5TZ20 316 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 SSX6Q7RTT6 188 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 FAM220AQ7Z4H9 259 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 LINC01356Q8N9X3 169 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 CPEB3Q8NE35 698 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 OR13F1Q8NGS4 319 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 HAVCR2Q8TDQ0 301 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 OR5M11Q96RB7 305 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 EIF3KQ9UBQ5 218 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 CYB5R1Q9UHQ9 305 aa15.38■□□□□ 0.05
SQSTM1-204ENST00000453046 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.37■□□□□ 0.054e-19■■■□□ 15.6
SQSTM1-204ENST00000453046 SULT1C4O75897 302 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 ZNF250P15622 560 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 TAS2R43P59537 309 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 MRPL28Q13084 256 aaKnown RBP15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 CR1LQ2VPA4 569 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 FAM27BQ5VT28 67 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 UNQ6126/PRO20091Q6UXV3 157 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 PLEKHG7Q6ZR37 379 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 SATL1Q86VE3 508 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 ALDH16A1Q8IZ83 802 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 OR1J1Q8NGS3 322 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 SPRYD4Q8WW59 207 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 C4orf36Q96KX1 117 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 MGLLQ99685 303 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 WACQ9BTA9 647 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 CDADC1Q9BWV3 514 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 NARFLQ9H6Q4 476 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 EMC7Q9NPA0 242 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 TRIM36Q9NQ86 728 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 LHFPL6Q9Y693 200 aa15.37■□□□□ 0.05
SQSTM1-204ENST00000453046 IGLV3-9A0A075B6K5 115 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 SMIM31A0A1B0GVY4 71 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 C5orf49A4QMS7 147 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 C17orf100A8MU93 164 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 PPIHO43447 177 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 SCG5P05408 212 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 KRT8P05787 483 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 CST2P09228 141 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 GCH1P30793 250 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 RPS27P42677 84 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 MAGEB1P43366 347 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 GDI2P50395 445 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 HCCSP53701 268 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 TMEM33P57088 247 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 PCBD1P61457 104 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 CCL8P80075 99 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 ROM1Q03395 351 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 AQP6Q13520 282 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 EIF2B1Q14232 305 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 ZNF684Q5T5D7 378 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 KCTD18Q6PI47 426 aaPredicted RBP15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 KCTD20Q7Z5Y7 419 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 OR2AJ1Q8NGZ0 328 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 AKR7LQ8NHP1 331 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 ST7LQ8TDW4 575 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 OR8B4Q96RC9 309 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 ABHD6Q9BV23 337 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 ZNF416Q9BWM5 594 aa15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 ZNF275Q9NSD4 429 aaPredicted RBP15.36■□□□□ 0.05
SQSTM1-204ENST00000453046 PRR32B1ATL7 298 aa15.35■□□□□ 0.05
SQSTM1-204ENST00000453046 TPD52L2O43399 206 aaKnown RBP15.35■□□□□ 0.05
SQSTM1-204ENST00000453046 NCR1O76036 304 aa15.35■□□□□ 0.05
SQSTM1-204ENST00000453046 ABHD16AO95870 558 aa15.35■□□□□ 0.05
SQSTM1-204ENST00000453046 MRPS11P82912 194 aaKnown RBP15.35■□□□□ 0.05
SQSTM1-204ENST00000453046 PSG4Q00888 419 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms