RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 DRAM2Q6UX65 266 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 C19orf18Q8NEA5 215 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 SDR9C7Q8NEX9 313 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 OR4K13Q8NH42 304 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 LRTOMTQ8WZ04 291 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 MAP6Q96JE9 813 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 SMURF1Q9HCE7 757 aa9.02□□□□□ -0.97
USP1-204ENST00000452143 MRPL22Q9NWU5 206 aaKnown RBP9.02□□□□□ -0.97
USP1-204ENST00000452143 IGHV1-69DA0A0B4J2H0 117 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.01□□□□□ -0.97
USP1-204ENST00000452143 OR6C68A6NDL8 312 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 OR10H3O60404 316 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 DIRAS1O95057 198 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 GADD45GO95257 159 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 IGHV1-69P01742 117 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 SEMG1P04279 462 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 ZNF823P16415 610 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 PSME3P61289 254 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 SPIBQ01892 262 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 ZNF92Q03936 586 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 SNAI3Q3KNW1 292 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 LCE2CQ5TA81 110 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 TEX36Q5VZQ5 186 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 SFRP4Q6FHJ7 346 aaPredicted RBP9.01□□□□□ -0.97
USP1-204ENST00000452143 GLYATQ6IB77 296 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 RPL13AP3Q6NVV1 102 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 NAA40Q86UY6 237 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 GCSAMQ8N6F7 178 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 FAM86B1Q8N7N1 296 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 CMTM5Q96DZ9 223 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 DMRTB1Q96MA1 342 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 CCT8L2Q96SF2 557 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 NSRP1Q9H0G5 558 aaKnown RBP9.01□□□□□ -0.97
USP1-204ENST00000452143 SIRPDQ9H106 197 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 FN3KQ9H479 309 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 GORASP2Q9H8Y8 452 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 TNFRSF19Q9NS68 423 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 C14orf119Q9NWQ9 140 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 KAAG1Q9UBP8 84 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 KPTNQ9Y664 436 aa9.01□□□□□ -0.97
USP1-204ENST00000452143 GGT3PA6NGU5 568 aa9□□□□□ -0.97
USP1-204ENST00000452143 BHLHE40O14503 412 aa9□□□□□ -0.97
USP1-204ENST00000452143 XRCC2O43543 280 aa9□□□□□ -0.97
USP1-204ENST00000452143 GPR137BO60478 399 aa9□□□□□ -0.97
USP1-204ENST00000452143 CLPXO76031 633 aa9□□□□□ -0.97
USP1-204ENST00000452143 GSSP48637 474 aa9□□□□□ -0.97
USP1-204ENST00000452143 KHDRBS1Q07666 443 aaKnown RBP eCLIP9□□□□□ -0.97
USP1-204ENST00000452143 SRSF4Q08170 494 aaKnown RBP9□□□□□ -0.97
USP1-204ENST00000452143 TSPAN31Q12999 210 aa9□□□□□ -0.97
USP1-204ENST00000452143 CDONQ4KMG0 1287 aa9□□□□□ -0.97
USP1-204ENST00000452143 GLYATL3Q5SZD4 288 aa9□□□□□ -0.97
USP1-204ENST00000452143 GDPGP1Q6ZNW5 385 aa9□□□□□ -0.97
USP1-204ENST00000452143 RHOUQ7L0Q8 258 aa9□□□□□ -0.97
USP1-204ENST00000452143 FAM90A1Q86YD7 464 aa9□□□□□ -0.97
USP1-204ENST00000452143 SCCPDHQ8NBX0 429 aa9□□□□□ -0.97
USP1-204ENST00000452143 PROKR2Q8NFJ6 384 aa9□□□□□ -0.97
USP1-204ENST00000452143 OR52L1Q8NGH7 329 aa9□□□□□ -0.97
USP1-204ENST00000452143 OR2T4Q8NH00 348 aa9□□□□□ -0.97
USP1-204ENST00000452143 OR2AE1Q8NHA4 323 aa9□□□□□ -0.97
USP1-204ENST00000452143 LINC01006Q8NI28 216 aa9□□□□□ -0.97
USP1-204ENST00000452143 UBE2FQ969M7 185 aa9□□□□□ -0.97
USP1-204ENST00000452143 PYURFQ96I23 114 aa9□□□□□ -0.97
USP1-204ENST00000452143 C1orf123Q9NWV4 160 aa9□□□□□ -0.97
USP1-204ENST00000452143 CD300AQ9UGN4 299 aa9□□□□□ -0.97
USP1-204ENST00000452143 MAGEL2Q9UJ55 1249 aa9□□□□□ -0.97
USP1-204ENST00000452143 RNF114Q9Y508 228 aa9□□□□□ -0.97
USP1-204ENST00000452143 COMMD3-BMI1R4GMX3 469 aa9□□□□□ -0.97
USP1-204ENST00000452143 A0A0U1RQK1 487 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 A0A1B0GVI7 797 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 hCG_1807616A0A1W2PRN6 198 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 A6NLC8 198 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 DVL1O14640 695 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 TIPRLO75663 272 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 LHBP01229 141 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 IGHV4-59P01825 116 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 GYPAP02724 150 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 FABP3P05413 133 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 MUC1P15941 1255 aaPredicted RBP8.99□□□□□ -0.97
USP1-204ENST00000452143 GRK5P34947 590 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 DDOSTP39656 456 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 IER3P46695 156 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 PROK1P58294 105 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 HOXA4Q00056 320 aaPredicted RBP8.99□□□□□ -0.97
USP1-204ENST00000452143 DBPQ10586 325 aaPredicted RBP8.99□□□□□ -0.97
USP1-204ENST00000452143 METAP1DQ6UB28 335 aaPredicted RBP8.99□□□□□ -0.97
USP1-204ENST00000452143 BTN2A1Q7KYR7 527 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 DCXRQ7Z4W1 244 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 ZDHHC21Q8IVQ6 265 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 BOLLQ8N9W6 283 aaKnown RBP8.99□□□□□ -0.97
USP1-204ENST00000452143 OR56B2PQ8NGI1 322 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 NPRL2Q8WTW4 380 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 LHX4Q969G2 390 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 SPSB4Q96A44 273 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 MCUR1Q96AQ8 359 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 C12orf43Q96C57 262 aaKnown RBP8.99□□□□□ -0.97
USP1-204ENST00000452143 KCNJ15Q99712 375 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 RBM4BQ9BQ04 359 aaKnown RBP8.99□□□□□ -0.97
USP1-204ENST00000452143 COPS4Q9BT78 406 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 DPAGT1Q9H3H5 408 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 RNPEPL1Q9HAU8 725 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms