RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 DECR2Q9NUI1 292 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 MRPS18AQ9NVS2 196 aaKnown RBP12.18□□□□□ -0.46
COL3A1-203ENST00000450867 MRPL15Q9P015 296 aaKnown RBP12.18□□□□□ -0.46
COL3A1-203ENST00000450867 NUFIP1Q9UHK0 495 aaKnown RBP12.18□□□□□ -0.46
COL3A1-203ENST00000450867 MRM2Q9UI43 246 aaKnown RBP12.18□□□□□ -0.46
COL3A1-203ENST00000450867 EXOGQ9Y2C4 368 aaKnown RBP12.18□□□□□ -0.46
COL3A1-203ENST00000450867 SONP18583 2426 aaKnown RBP12.18□□□□□ -0.46
COL3A1-203ENST00000450867 HIVEP2P31629 2446 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 A0A1W2PQL4 384 aaPredicted RBP12.17□□□□□ -0.46
COL3A1-203ENST00000450867 LYNX1G3V0Z9 82 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 H0YAE9 185 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 H0YJX3 145 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 WBP4O75554 376 aaKnown RBP12.17□□□□□ -0.46
COL3A1-203ENST00000450867 SULT1C4O75897 302 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 PTBP3O95758 552 aaKnown RBP12.17□□□□□ -0.46
COL3A1-203ENST00000450867 IGLV3-1P01715 115 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 LYNX1P0DP58 116 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 ACTC1P68032 377 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 ACTA1P68133 377 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 TNFAIP6P98066 277 aaPredicted RBP12.17□□□□□ -0.46
COL3A1-203ENST00000450867 FAM3AP98173 230 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF91Q05481 1191 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 KRTAP1-1Q07627 177 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 IL18R1Q13478 541 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 TSTQ16762 297 aaKnown RBP12.17□□□□□ -0.46
COL3A1-203ENST00000450867 TIGD6Q17RP2 521 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF829Q3KNS6 432 aaPredicted RBP12.17□□□□□ -0.46
COL3A1-203ENST00000450867 SSX6Q7RTT6 188 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 KLBQ86Z14 1044 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 EGFL6Q8IUX8 553 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 OR5AS1Q8N127 324 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 DHRSXQ8N5I4 330 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 CELF2-AS1Q8N7Q2 184 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 OR8B12Q8NGG6 310 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 APH1BQ8WW43 257 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 REEP6Q96HR9 211 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 PGAM5Q96HS1 289 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 BPESC1Q9GZL8 116 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 MOB1AQ9H8S9 216 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF275Q9NSD4 429 aaPredicted RBP12.17□□□□□ -0.46
COL3A1-203ENST00000450867 TMEM100Q9NV29 134 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 NOP16Q9Y3C1 178 aaKnown RBP12.17□□□□□ -0.46
COL3A1-203ENST00000450867 PCDHGB1Q9Y5G3 927 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 HSPE1-MOB4S4R3N1 261 aa12.17□□□□□ -0.46
COL3A1-203ENST00000450867 TMEM269A0A1B0GVZ9 245 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 TBX1O43435 398 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 GMDSO60547 372 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 DBTP11182 482 aaKnown RBP12.16□□□□□ -0.46
COL3A1-203ENST00000450867 TNFRSF1AP19438 455 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 USF1P22415 310 aaPredicted RBP12.16□□□□□ -0.46
COL3A1-203ENST00000450867 GATA4P43694 442 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 PRSS12P56730 875 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF85Q03923 595 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 RIPK1Q13546 671 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 SPRNQ5BIV9 151 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 BHLHE23Q8NDY6 225 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 OR2Z1Q8NG97 314 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 OR56B2PQ8NGI1 322 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 SPRYD4Q8WW59 207 aaPredicted RBP12.16□□□□□ -0.46
COL3A1-203ENST00000450867 LGALS12Q96DT0 336 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 RNFT2Q96EX2 444 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 ADI1Q9BV57 179 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 AASSQ9UDR5 926 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 IKZF2Q9UKS7 526 aa12.16□□□□□ -0.46
COL3A1-203ENST00000450867 FN1P02751 2386 aaKnown RBP12.15□□□□□ -0.46
COL3A1-203ENST00000450867 IGHV4-61A0A0C4DH41 118 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 GGT3PA6NGU5 568 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 IFNL4K9M1U5 179 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 PSMD9O00233 223 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 APOL3O95236 402 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 PNPP00491 289 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 IGHA1P01876 353 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 KRT8P05787 483 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 CD200P41217 278 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 GSK3AP49840 483 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 RAB40BQ12829 278 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 SNCBQ16143 134 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 CARTPTQ16568 116 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 CDONQ4KMG0 1287 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 PLEKHG7Q6ZR37 379 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 Q6ZSR3 168 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 SETD9Q8NE22 299 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 CSNK2A3Q8NEV1 391 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 OR10H4Q8NGA5 316 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 OR10AD1Q8NGE0 317 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 FBLIM1Q8WUP2 373 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 NRG4Q8WWG1 115 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 MEGF10Q96KG7 1140 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 LYZL4Q96KX0 146 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 OR2V2Q96R30 315 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 JAM3Q9BX67 310 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 TTTY10Q9BZA0 68 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 PBOV1Q9GZY1 135 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 VCXQ9H320 206 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 BRD7Q9NPI1 651 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 G6PC2Q9NQR9 355 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 R4GMQ9 66 aa12.15□□□□□ -0.46
COL3A1-203ENST00000450867 ZFHX3Q15911 3703 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 METTL15A6NJ78 407 aa12.14□□□□□ -0.47
COL3A1-203ENST00000450867 H0YL77 283 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms