RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 Q9N2J8 555 aa2□□□□□ -2.09
USP53-202ENST00000450251 SIRT3Q9NTG7 399 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 CBLN4Q9NTU7 201 aa2□□□□□ -2.09
USP53-202ENST00000450251 OSGIN2Q9Y236 505 aa2□□□□□ -2.09
USP53-202ENST00000450251 OR51B2Q9Y5P1 312 aa2□□□□□ -2.09
USP53-202ENST00000450251 A0A1W2PPE2 198 aa2□□□□□ -2.09
USP53-202ENST00000450251 ZFP92A6NM28 416 aa2□□□□□ -2.09
USP53-202ENST00000450251 SCDO00767 359 aa2□□□□□ -2.09
USP53-202ENST00000450251 DVL2O14641 736 aa2□□□□□ -2.09
USP53-202ENST00000450251 BNIP3LO60238 219 aa2□□□□□ -2.09
USP53-202ENST00000450251 SLC16A7O60669 478 aa2□□□□□ -2.09
USP53-202ENST00000450251 ICOSLGO75144 302 aa2□□□□□ -2.09
USP53-202ENST00000450251 HSBP1O75506 76 aa2□□□□□ -2.09
USP53-202ENST00000450251 IGF2P01344 180 aa2□□□□□ -2.09
USP53-202ENST00000450251 ESDP10768 282 aa2□□□□□ -2.09
USP53-202ENST00000450251 SELLP14151 372 aa2□□□□□ -2.09
USP53-202ENST00000450251 AVPR2P30518 371 aa2□□□□□ -2.09
USP53-202ENST00000450251 OR1D2P34982 312 aa2□□□□□ -2.09
USP53-202ENST00000450251 GJA4P35212 333 aa2□□□□□ -2.09
USP53-202ENST00000450251 TSFMP43897 325 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 PPICP45877 212 aa2□□□□□ -2.09
USP53-202ENST00000450251 PPOXP50336 477 aa2□□□□□ -2.09
USP53-202ENST00000450251 PDX1P52945 283 aa2□□□□□ -2.09
USP53-202ENST00000450251 EMP2P54851 167 aa2□□□□□ -2.09
USP53-202ENST00000450251 TMPRSS3P57727 454 aa2□□□□□ -2.09
USP53-202ENST00000450251 TAS2R45P59539 299 aa2□□□□□ -2.09
USP53-202ENST00000450251 CKS1BP61024 79 aa2□□□□□ -2.09
USP53-202ENST00000450251 SNRPNP63162 240 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 EIF3IQ13347 325 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 GAB1Q13480 694 aa2□□□□□ -2.09
USP53-202ENST00000450251 CCL15Q16663 113 aa2□□□□□ -2.09
USP53-202ENST00000450251 SOWAHAQ2M3V2 549 aa2□□□□□ -2.09
USP53-202ENST00000450251 SNAI3Q3KNW1 292 aa2□□□□□ -2.09
USP53-202ENST00000450251 Q5BKY6 102 aa2□□□□□ -2.09
USP53-202ENST00000450251 TTC32Q5I0X7 151 aa2□□□□□ -2.09
USP53-202ENST00000450251 GLYATL3Q5SZD4 288 aa2□□□□□ -2.09
USP53-202ENST00000450251 SYPL2Q5VXT5 272 aa2□□□□□ -2.09
USP53-202ENST00000450251 AGTRAPQ6RW13 159 aa2□□□□□ -2.09
USP53-202ENST00000450251 DHRS11Q6UWP2 260 aa2□□□□□ -2.09
USP53-202ENST00000450251 NRSN1Q8IZ57 195 aa2□□□□□ -2.09
USP53-202ENST00000450251 MAML2Q8IZL2 1156 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 CLECL1Q8IZS7 167 aa2□□□□□ -2.09
USP53-202ENST00000450251 HIST3H2BBQ8N257 126 aa2□□□□□ -2.09
USP53-202ENST00000450251 LRRC25Q8N386 305 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 WDTC1Q8N5D0 677 aa2□□□□□ -2.09
USP53-202ENST00000450251 NECAP1Q8NC96 275 aa2□□□□□ -2.09
USP53-202ENST00000450251 OR2I1PQ8NGU4 316 aa2□□□□□ -2.09
USP53-202ENST00000450251 PTPMT1Q8WUK0 201 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 TMEM190Q8WZ59 177 aa2□□□□□ -2.09
USP53-202ENST00000450251 NXPE3Q969Y0 559 aa2□□□□□ -2.09
USP53-202ENST00000450251 NEIL1Q96FI4 390 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 TRMT61AQ96FX7 289 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 MRAP2Q96G30 205 aa2□□□□□ -2.09
USP53-202ENST00000450251 SLC25A44Q96H78 314 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 PGAM5Q96HS1 289 aa2□□□□□ -2.09
USP53-202ENST00000450251 SPXQ9BT56 116 aa2□□□□□ -2.09
USP53-202ENST00000450251 SOX7Q9BT81 388 aa2□□□□□ -2.09
USP53-202ENST00000450251 FAM103A1Q9BTL3 118 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 CHST6Q9GZX3 395 aa2□□□□□ -2.09
USP53-202ENST00000450251 OR10A2Q9H208 303 aa2□□□□□ -2.09
USP53-202ENST00000450251 P2RY12Q9H244 342 aa2□□□□□ -2.09
USP53-202ENST00000450251 KCNK12Q9HB15 430 aa2□□□□□ -2.09
USP53-202ENST00000450251 CDH20Q9HBT6 801 aa2□□□□□ -2.09
USP53-202ENST00000450251 SEPSECSQ9HD40 501 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 DMRT3Q9NQL9 472 aa2□□□□□ -2.09
USP53-202ENST00000450251 ADAMTS5Q9UNA0 930 aa2□□□□□ -2.09
USP53-202ENST00000450251 SLC22A13Q9Y226 551 aa2□□□□□ -2.09
USP53-202ENST00000450251 GPR55Q9Y2T6 319 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 SCN9AQ15858 1988 aa2□□□□□ -2.09
USP53-202ENST00000450251 SLC17A2O00624 439 aa2□□□□□ -2.09
USP53-202ENST00000450251 ZNF264O43296 627 aa2□□□□□ -2.09
USP53-202ENST00000450251 VEGFDO43915 354 aa2□□□□□ -2.09
USP53-202ENST00000450251 GOSR1O95249 250 aa2□□□□□ -2.09
USP53-202ENST00000450251 WNT11O96014 354 aa2□□□□□ -2.09
USP53-202ENST00000450251 CD74P04233 296 aa2□□□□□ -2.09
USP53-202ENST00000450251 TMIGD3P0DMS9 266 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 IRF1P10914 325 aa2□□□□□ -2.09
USP53-202ENST00000450251 HIST1H1CP16403 213 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 HTR1DP28221 377 aa2□□□□□ -2.09
USP53-202ENST00000450251 IL12BP29460 328 aa2□□□□□ -2.09
USP53-202ENST00000450251 APOBEC3AP31941 199 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 MC5RP33032 325 aa2□□□□□ -2.09
USP53-202ENST00000450251 CD68P34810 354 aaPredicted RBP2□□□□□ -2.09
USP53-202ENST00000450251 MAS1LP35410 378 aa2□□□□□ -2.09
USP53-202ENST00000450251 NOVP48745 357 aa2□□□□□ -2.09
USP53-202ENST00000450251 ARL4DP49703 201 aa2□□□□□ -2.09
USP53-202ENST00000450251 HTR6P50406 440 aa2□□□□□ -2.09
USP53-202ENST00000450251 AGFG1P52594 562 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 SEC11AP67812 179 aa2□□□□□ -2.09
USP53-202ENST00000450251 PLGLB1Q02325 96 aa2□□□□□ -2.09
USP53-202ENST00000450251 ZNF117Q03924 483 aa2□□□□□ -2.09
USP53-202ENST00000450251 ACVR1Q04771 509 aa2□□□□□ -2.09
USP53-202ENST00000450251 HNRNPA1L2Q32P51 320 aaKnown RBP2□□□□□ -2.09
USP53-202ENST00000450251 TIGITQ495A1 244 aa2□□□□□ -2.09
USP53-202ENST00000450251 FCRL6Q6DN72 434 aa2□□□□□ -2.09
USP53-202ENST00000450251 ZNF774Q6NX45 483 aa2□□□□□ -2.09
USP53-202ENST00000450251 FAM71F2Q6NXP2 309 aa2□□□□□ -2.09
USP53-202ENST00000450251 SLC25A34Q6PIV7 304 aa2□□□□□ -2.09
USP53-202ENST00000450251 NXPE4Q6UWF7 544 aa2□□□□□ -2.09
USP53-202ENST00000450251 TMIGD1Q6UXZ0 262 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms