RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 GAL3ST2Q9H3Q3 398 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 SEMA5BQ9P283 1151 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 MYOTQ9UBF9 498 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 OR52A1Q9UKL2 312 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 KCNK6Q9Y257 313 aa7.7□□□□□ -1.18
LSM5-208ENST00000450169 MTCL1Q9Y4B5 1905 aaKnown RBP7.7□□□□□ -1.18
LSM5-208ENST00000450169 A0A1B0GV50 99 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 H0YL77 283 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ITGB1BP1O14713 200 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 LDLRAD4O15165 306 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 CDC14BO60729 498 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 CA11O75493 328 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 C1QL1O75973 258 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 NDUFB2O95178 105 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 SFT2D2O95562 160 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ABHD16AO95870 558 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 OR4A8P0C604 315 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 CSNK2A2P19784 350 aaPredicted RBP7.69□□□□□ -1.18
LSM5-208ENST00000450169 TBPP20226 339 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 LMO1P25800 156 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 CTGFP29279 349 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 SNRPD1P62314 119 aaKnown RBP7.69□□□□□ -1.18
LSM5-208ENST00000450169 H3F3AP84243 136 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 SLC22A6Q4U2R8 563 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 GLYATL3Q5SZD4 288 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 CLEC18BQ6UXF7 455 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 MRPL52Q86TS9 123 aaKnown RBP7.69□□□□□ -1.18
LSM5-208ENST00000450169 HOGA1Q86XE5 327 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ZNF248Q8NDW4 579 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 SVIPQ8NHG7 77 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 THRSPQ92748 146 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ARSGQ96EG1 525 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ADAD1Q96M93 576 aaKnown RBP7.69□□□□□ -1.18
LSM5-208ENST00000450169 KXD1Q9BQD3 176 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ZDHHC6Q9H6R6 413 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 PARD6AQ9NPB6 346 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 SUSD2Q9UGT4 822 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 TAC3Q9UHF0 121 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 IKZF2Q9UKS7 526 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 PLAGL1Q9UM63 463 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 MEMO1Q9Y316 297 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 STRAPQ9Y3F4 350 aaKnown RBP7.69□□□□□ -1.18
LSM5-208ENST00000450169 A0A0C4DFX4 3053 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ZNF840PA6NDX5 716 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 HSD17B6O14756 317 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 TCF21O43680 179 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 MMP7P09237 267 aaPredicted RBP7.69□□□□□ -1.18
LSM5-208ENST00000450169 GIMD1P0DJR0 217 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ZNF708P17019 499 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 KLK2P20151 261 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 SERPINA2P20848 420 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 RPL4P36578 427 aaKnown RBP7.69□□□□□ -1.18
LSM5-208ENST00000450169 PPP1CCP36873 323 aaKnown RBP7.69□□□□□ -1.18
LSM5-208ENST00000450169 RPL29P47914 159 aaKnown RBP7.69□□□□□ -1.18
LSM5-208ENST00000450169 CEBPGP53567 150 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 SUCLG1P53597 346 aaKnown RBP7.69□□□□□ -1.18
LSM5-208ENST00000450169 TLE4Q04727 773 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 SPEM2Q0P670 501 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 IL15RAQ13261 267 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 IQCJQ1A5X6 159 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ANKRD55Q3KP44 614 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 FBXW9Q5XUX1 488 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 VHLLQ6RSH7 139 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ZNF793Q6ZN11 406 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 SLC16A9Q7RTY1 509 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 EXD3Q8N9H8 876 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 RCBTB1Q8NDN9 531 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 OR1P1Q8NH06 330 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 FIBINQ8TAL6 211 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 AQP3Q92482 292 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 URM1Q9BTM9 101 aaKnown RBP7.69□□□□□ -1.18
LSM5-208ENST00000450169 FAAP24Q9BTP7 215 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ALG12Q9BV10 488 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 NUDT9Q9BW91 350 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 NMNAT2Q9BZQ4 307 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 OR8D2Q9GZM6 311 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 ARV1Q9H2C2 271 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 LPAR2Q9HBW0 351 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 GTF2A1LQ9UNN4 478 aa7.69□□□□□ -1.18
LSM5-208ENST00000450169 A0A1W2PR48 441 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 LNP1A1A4G5 178 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 ATXN7O15265 892 aaPredicted RBP7.68□□□□□ -1.18
LSM5-208ENST00000450169 ABLIM3O94929 683 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 APODP05090 189 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 CST2P09228 141 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 CTSAP10619 480 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 TMEM11P17152 192 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 GABRA4P48169 554 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 LINC01590Q5TEZ4 76 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 SAMD5Q5TGI4 173 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 AADACL3Q5VUY0 350 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 ABLIM2Q6H8Q1 611 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 ETFRF1Q6IPR1 90 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 MFSD12Q6NUT3 480 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 C17orf99Q6UX52 265 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 ZNF429Q86V71 674 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 OR10A7Q8NGE5 316 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 OR51A2Q8NGJ7 313 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 TMEM230Q96A57 120 aa7.68□□□□□ -1.18
LSM5-208ENST00000450169 TVP23CQ96ET8 276 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms