RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 OR6N2Q8NGY6 317 aa18.37■□□□□ 0.53
CPSF7-208ENST00000450000 OR8S1Q8NH09 359 aa18.37■□□□□ 0.53
CPSF7-208ENST00000450000 ZMYND19Q96E35 227 aaPredicted RBP18.37■□□□□ 0.53
CPSF7-208ENST00000450000 INTS14Q96SY0 518 aa18.37■□□□□ 0.53
CPSF7-208ENST00000450000 THTPAQ9BU02 230 aa18.37■□□□□ 0.53
CPSF7-208ENST00000450000 TOR3AQ9H497 397 aa18.37■□□□□ 0.53
CPSF7-208ENST00000450000 ZNF556Q9HAH1 456 aa18.37■□□□□ 0.53
CPSF7-208ENST00000450000 C14orf119Q9NWQ9 140 aa18.37■□□□□ 0.53
CPSF7-208ENST00000450000 ERVK-18Q9QC07 812 aa18.37■□□□□ 0.53
CPSF7-208ENST00000450000 ZNF69Q9UC07 566 aa18.37■□□□□ 0.53
CPSF7-208ENST00000450000 IGHV2-70DA0A0C4DH43 119 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 A0A1B0GWJ7 208 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 hCG_1807616A0A1W2PRN6 198 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 E2F6O75461 281 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 GRPP07492 148 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 CD80P33681 288 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 DDOSTP39656 456 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 PAX8Q06710 450 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 TEX30Q5JUR7 227 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 PARP8Q8N3A8 854 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 ZDHHC22Q8N966 263 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 PLPP7Q8NBV4 271 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 C19orf18Q8NEA5 215 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 DVL3Q92997 716 aaPredicted RBP18.36■□□□□ 0.53
CPSF7-208ENST00000450000 TECTBQ96PL2 329 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 NUDT16L1Q9BRJ7 211 aaKnown RBP18.36■□□□□ 0.53
CPSF7-208ENST00000450000 CHID1Q9BWS9 393 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 TEX12Q9BXU0 123 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 ZMAT3Q9HA38 289 aaKnown RBP18.36■□□□□ 0.53
CPSF7-208ENST00000450000 CMC2Q9NRP2 79 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 VNN3Q9NY84 501 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 KIF17Q9P2E2 1029 aa18.36■□□□□ 0.53
CPSF7-208ENST00000450000 WNK2Q9Y3S1 2297 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 PHYHO14832 338 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 CLUP10909 449 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 HOXB6P17509 224 aaKnown RBP18.35■□□□□ 0.53
CPSF7-208ENST00000450000 GSTT1P30711 240 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 OTX1P32242 354 aaPredicted RBP18.35■□□□□ 0.53
CPSF7-208ENST00000450000 GRK5P34947 590 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 CX3CR1P49238 355 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 COMPP49747 757 aaPredicted RBP18.35■□□□□ 0.53
CPSF7-208ENST00000450000 MPPED2Q15777 294 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 SFRP4Q6FHJ7 346 aaPredicted RBP18.35■□□□□ 0.53
CPSF7-208ENST00000450000 SHFQ7M4L6 423 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.35■□□□□ 0.53
CPSF7-208ENST00000450000 OR56B2PQ8NGI1 322 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 FEVQ99581 238 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 NIPSNAP1Q9BPW8 284 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 NMNAT2Q9BZQ4 307 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 OR51V1Q9H2C8 321 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 C1orf123Q9NWV4 160 aa18.35■□□□□ 0.53
CPSF7-208ENST00000450000 IGHV3OR16-10A0A075B7F0 116 aa18.34■□□□□ 0.53
CPSF7-208ENST00000450000 TRAV38-1A0A0B4J264 116 aa18.34■□□□□ 0.53
CPSF7-208ENST00000450000 DHRS12A0PJE2 317 aa18.34■□□□□ 0.53
CPSF7-208ENST00000450000 PPIAL4GP0DN37 164 aa18.34■□□□□ 0.53
CPSF7-208ENST00000450000 CFL1P23528 166 aaKnown RBP18.34■□□□□ 0.53
CPSF7-208ENST00000450000 NPY4RP50391 375 aa18.34■□□□□ 0.53
CPSF7-208ENST00000450000 CD276Q5ZPR3 534 aa18.34■□□□□ 0.53
CPSF7-208ENST00000450000 WDR25Q64LD2 544 aaPredicted RBP18.34■□□□□ 0.53
CPSF7-208ENST00000450000 DOK3Q7L591 496 aa18.34■□□□□ 0.53
CPSF7-208ENST00000450000 DPY19L4Q7Z388 723 aa18.34■□□□□ 0.53
CPSF7-208ENST00000450000 C1orf21Q9H246 121 aa18.34■□□□□ 0.53
CPSF7-208ENST00000450000 YY1AP1Q9H869 796 aa18.34■□□□□ 0.53
CPSF7-208ENST00000450000 ESM1Q9NQ30 184 aa18.34■□□□□ 0.53
CPSF7-208ENST00000450000 PDP1Q9P0J1 537 aaPredicted RBP18.34■□□□□ 0.53
CPSF7-208ENST00000450000 KIR2DS1A0A191URI9 304 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 FAM183AA6NL82 134 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 C3orf80F5H4A9 247 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 LGALS8O00214 317 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 NDUFA2O43678 99 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 ENSAO43768 121 aaKnown RBP18.33■□□□□ 0.52
CPSF7-208ENST00000450000 H2BFMP0C1H6 154 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 PRTN3P24158 256 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 GNALP38405 381 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 FOXL1Q12952 345 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 PCK2Q16822 640 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 GFOD2Q3B7J2 385 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 KLF17Q5JT82 389 aaPredicted RBP18.33■□□□□ 0.52
CPSF7-208ENST00000450000 LYPD2Q6UXB3 125 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 CD300LDQ6UXZ3 194 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 BCL6BQ8N143 479 aaPredicted RBP18.33■□□□□ 0.52
CPSF7-208ENST00000450000 IQCF1Q8N6M8 205 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 SLC25A28Q96A46 364 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 CLPTM1LQ96KA5 538 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 DUX5Q96PT3 197 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 OR10A2Q9H208 303 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 MED20Q9H944 212 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 DNAJC27Q9NZQ0 273 aa18.33■□□□□ 0.52
CPSF7-208ENST00000450000 TRAV40A0A0B4J280 105 aa18.32■□□□□ 0.52
CPSF7-208ENST00000450000 AQP12BA6NM10 295 aa18.32■□□□□ 0.52
CPSF7-208ENST00000450000 PRR23D1E9PI22 279 aaPredicted RBP18.32■□□□□ 0.52
CPSF7-208ENST00000450000 ADAM20O43506 726 aa18.32■□□□□ 0.52
CPSF7-208ENST00000450000 GLCEO94923 617 aa18.32■□□□□ 0.52
CPSF7-208ENST00000450000 PRR23D2P0DMB1 279 aaPredicted RBP18.32■□□□□ 0.52
CPSF7-208ENST00000450000 SNCBQ16143 134 aa18.32■□□□□ 0.52
CPSF7-208ENST00000450000 KLHL12Q53G59 568 aa18.32■□□□□ 0.52
CPSF7-208ENST00000450000 FAM57BQ71RH2 274 aa18.32■□□□□ 0.52
CPSF7-208ENST00000450000 SPATA24Q86W54 205 aa18.32■□□□□ 0.52
CPSF7-208ENST00000450000 AQP12AQ8IXF9 295 aa18.32■□□□□ 0.52
CPSF7-208ENST00000450000 FTMTQ8N4E7 242 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms