RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 SVEP1Q4LDE5 3571 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 ARHGAP32A7KAX9 2087 aa12.81□□□□□ -0.36
CHD3-205ENST00000449744 NBEAL1Q6ZS30 2694 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 GLCEO94923 617 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 FSTL3O95633 263 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 APOC1P02654 83 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 ANXA2P07355 339 aaKnown RBP12.8□□□□□ -0.36
CHD3-205ENST00000449744 GSTT1P30711 240 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 PMELP40967 661 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 CX3CR1P49238 355 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 ACTG1P63261 375 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 MZT1Q08AG7 82 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 GINS1Q14691 196 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 ZNF404Q494X3 552 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 FAM201AQ5SY85 155 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 LINC01590Q5TEZ4 76 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 BTNL3Q6UXE8 466 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 SHFQ7M4L6 423 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 DPY19L4Q7Z388 723 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 TMEM179BQ7Z7N9 219 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 SPERTQ8NA61 448 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 Q8TCH9 128 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 C22orf15Q8WYQ4 148 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 TMEM246Q9BRR3 403 aa12.8□□□□□ -0.36
CHD3-205ENST00000449744 MRPL15Q9P015 296 aaKnown RBP12.8□□□□□ -0.36
CHD3-205ENST00000449744 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.79□□□□□ -0.36
CHD3-205ENST00000449744 C5orf63A6NC05 138 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 PRR23D1E9PI22 279 aaPredicted RBP12.79□□□□□ -0.36
CHD3-205ENST00000449744 FAM20BO75063 409 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 HMGN1P05114 100 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 PRR23D2P0DMB1 279 aaPredicted RBP12.79□□□□□ -0.36
CHD3-205ENST00000449744 OSMP13725 252 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 ANXA8P13928 327 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 CBX1P83916 185 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 MPPED2Q15777 294 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 TIGD6Q17RP2 521 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 C12orf54Q6X4T0 127 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 RBMS3Q6XE24 437 aaKnown RBP12.79□□□□□ -0.36
CHD3-205ENST00000449744 OR56B2PQ8NGI1 322 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 ABHD6Q9BV23 337 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 TEX12Q9BXU0 123 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 NTN4Q9HB63 628 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 RNF7Q9UBF6 113 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 NUP50Q9UKX7 468 aa12.79□□□□□ -0.36
CHD3-205ENST00000449744 ANKRD30BLA7E2S9 258 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 FKBP6O75344 327 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 DNAJC8O75937 253 aaPredicted RBP12.78□□□□□ -0.36
CHD3-205ENST00000449744 FSHBP01225 129 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 H2BFMP0C1H6 154 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 DDOSTP39656 456 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 PITPNBP48739 271 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 KCNJ8Q15842 424 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 KLHL12Q53G59 568 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 PLBD1Q6P4A8 553 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 LRRN1Q6UXK5 716 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 DCDC5Q6ZRR9 648 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.78□□□□□ -0.36
CHD3-205ENST00000449744 HS3ST5Q8IZT8 346 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 BOLLQ8N9W6 283 aaKnown RBP12.78□□□□□ -0.36
CHD3-205ENST00000449744 PLPP7Q8NBV4 271 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 RNF133Q8WVZ7 376 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 DVL3Q92997 716 aaPredicted RBP12.78□□□□□ -0.36
CHD3-205ENST00000449744 C14orf119Q9NWQ9 140 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 DNAJC27Q9NZQ0 273 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 CLN8Q9UBY8 286 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 POMPQ9Y244 141 aa12.78□□□□□ -0.36
CHD3-205ENST00000449744 A6NLC8 198 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 GRPP07492 148 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 PRKACGP22612 351 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 ANOS1P23352 680 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 CFL1P23528 166 aaKnown RBP12.77□□□□□ -0.37
CHD3-205ENST00000449744 RPS7P62081 194 aaKnown RBP12.77□□□□□ -0.37
CHD3-205ENST00000449744 FAM57BQ71RH2 274 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 TIGD4Q8IY51 512 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 C19orf18Q8NEA5 215 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 OR52H1Q8NGJ2 320 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 OR8S1Q8NH09 359 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 FAM216AQ8WUB2 273 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 THEM6Q8WUY1 208 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 RAB40AQ8WXH6 277 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 GCDHQ92947 438 aaPredicted RBP12.77□□□□□ -0.37
CHD3-205ENST00000449744 SPSB4Q96A44 273 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 SLC7A6OSQ96CW6 309 aaPredicted RBP12.77□□□□□ -0.37
CHD3-205ENST00000449744 ZMYND19Q96E35 227 aaPredicted RBP12.77□□□□□ -0.37
CHD3-205ENST00000449744 REEP6Q96HR9 211 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 PGAM5Q96HS1 289 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 OR10A2Q9H208 303 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 MMADHCQ9H3L0 296 aaPredicted RBP12.77□□□□□ -0.37
CHD3-205ENST00000449744 MARCH7Q9H992 704 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 BRD7Q9NPI1 651 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 KIF17Q9P2E2 1029 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 DNAJB9Q9UBS3 223 aa12.77□□□□□ -0.37
CHD3-205ENST00000449744 IGHV2-70DA0A0C4DH43 119 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 hCG_1807616A0A1W2PRN6 198 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 TCRBV3S1A0A5B6 114 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 LGALS8O00214 317 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 PRODHO43272 600 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 PTBP3O95758 552 aaKnown RBP12.76□□□□□ -0.37
CHD3-205ENST00000449744 LYNP07948 512 aa12.76□□□□□ -0.37
CHD3-205ENST00000449744 CD80P33681 288 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms