RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 SLC35A5Q9BS91 424 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 POLR2J2Q9GZM3 115 aaKnown RBP3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 SPRTNQ9H040 489 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 PORCNQ9H237 461 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 ARV1Q9H2C2 271 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 SRMSQ9H3Y6 488 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 RBKSQ9H477 322 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 CST9LQ9H4G1 147 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 REEP1Q9H902 201 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 EXOSC4Q9NPD3 245 aaKnown RBP3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 CLN6Q9NWW5 311 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 ABRACLQ9P1F3 81 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 ZNF282Q9UDV7 671 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 SIX4Q9UIU6 781 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 TSPAN16Q9UKR8 245 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 SH2B3Q9UQQ2 575 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 ANGPT4Q9Y264 503 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 EXOSC1Q9Y3B2 195 aaKnown RBP3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 RPL36Q9Y3U8 105 aaKnown RBP3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR10H1Q9Y4A9 318 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 TBL2Q9Y4P3 447 aaKnown RBP3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 CCL27Q9Y4X3 112 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 SNX10Q9Y5X0 201 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 HS3ST3B1Q9Y662 390 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 COX11Q9Y6N1 276 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 ANK1P16157 1881 aa3.21□□□□□ -1.9
HMGB3P8-201ENST00000449709 EVPLQ92817 2033 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 FXYD6-FXYD2A0A087WZ82 144 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TGIF2-C20orf24A0A0A6YYL0 155 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 KRTAP23-1A1A580 65 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 NPEPPSL1A6NEC2 478 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TVP23AA6NH52 213 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 DHRS7CA6NNS2 312 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 YJEFN3A6XGL0 299 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 HEPACAM2A8MVW5 462 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 C1QTNF3-AMACRE9PGA6 284 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 J3QR06 171 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 RNASET2O00584 256 aaKnown RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TNFRSF13BO14836 293 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TMPRSS11DO60235 418 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 NME2P1O60361 137 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ENTPD6O75354 484 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ECI2O75521 394 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 REM1O75628 298 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 RAB36O95755 333 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 CGAP01215 116 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 JCHAINP01591 159 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 HLA-DQB2P05538 268 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR4A8P0C604 315 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TRGC1P0CF51 173 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 FGF5P12034 268 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TPT1P13693 172 aaKnown RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 FOSL2P15408 326 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 CSNK2A2P19784 350 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TUBG1P23258 451 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 FCARP24071 287 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 DUSP1P28562 367 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 RPL4P36578 427 aaKnown RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 MTNR1AP48039 350 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 SULT1A2P50226 295 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 PPOXP50336 477 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 CCR8P51685 355 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 CRYBA2P53672 197 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 GEMP55040 296 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 NXPH1P58417 271 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 SUMO2P61956 95 aaKnown RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 DYNLT1P63172 113 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 RAE1P78406 368 aaKnown RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 SSBP2P81877 361 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ZNF616Q08AN1 781 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 PPP1R8Q12972 351 aaKnown RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 EBPQ15125 230 aaKnown RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TEAD2Q15562 447 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TGIF1Q15583 401 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 MAPK14Q16539 360 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 PLPPR5Q32ZL2 321 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 BEAN1Q3B7T3 259 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TMEM176BQ3YBM2 270 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ZNF658BQ4V348 819 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 C6orf136Q5SQH8 315 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 DCAF12L2Q5VW00 463 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TMEM225Q6GV28 225 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 OR6B2Q6IFH4 312 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 C11orf87Q6NUJ2 197 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 PRSS54Q6PEW0 395 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 CEACAM20Q6UY09 585 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ZNF836Q6ZNA1 936 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 FRRS1Q6ZNA5 592 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 Q6ZPB1 254 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 ZNF546Q86UE3 836 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 GGNQ86UU5 652 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 TMPRSS12Q86WS5 348 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 NRMQ8IXM6 262 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 UBALD2Q8IYN6 164 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 C10orf111Q8N326 155 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 GTPBP8Q8N3Z3 284 aaPredicted RBP3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 GALNT16Q8N428 558 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 FRMD1Q8N878 549 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 COX18Q8N8Q8 333 aa3.2□□□□□ -1.9
HMGB3P8-201ENST00000449709 SLC38A9Q8NBW4 561 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms