RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	AKR7A2	O43488	359 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	SORBS2	O94875	1100 aa	Known RBP	7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	IFI6	P09912	130 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	OR2T7	P0C7T2	308 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	GPR50	Q13585	617 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	TESK1	Q15569	626 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	IDNK	Q5T6J7	187 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	TMPRSS11F	Q6ZWK6	438 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	OR2M2	Q96R28	347 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	PLSCR4	Q9NRQ2	329 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544		B4DSR2	109 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	SELENOF	O60613	162 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	MITF	O75030	526 aa	Predicted RBP	7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	HNF4G	Q14541	408 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	RAB11B	Q15907	218 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	SLC35D3	Q5M8T2	416 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	ZNF620	Q6ZNG0	422 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	SLC16A9	Q7RTY1	509 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	LSMEM1	Q8N8F7	131 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	ZFP41	Q8N8Y5	198 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	FADS6	Q8N9I5	356 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544		Q8NA96	180 aa		7.39	□□□□□ -1.23
HCG18-238	ENST00000449544	MEIOC	A2RUB1	952 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	HLA-DOB	P13765	273 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	ACAA2	P42765	397 aa	Known RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	ERVK-16	P61578	105 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	GRK1	Q15835	563 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	IGFL2	Q6UWQ7	119 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	SKA3	Q8IX90	412 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	OR4K15	Q8NH41	348 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	C18orf12	Q96KH6	178 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	ZNF251	Q9BRH9	671 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	AICDA	Q9GZX7	198 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	SPACA1	Q9HBV2	294 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	B3GNT2	Q9NY97	397 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	CENPVL1	A0A0U1RR11	272 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544		M0R129	80 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	TERT	O14746	1132 aa	Known RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	RAMP1	O60894	148 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	PF4	P02776	101 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	ARF6	P62330	175 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	DMRTC1	Q5HYR2	192 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	NRGN	Q92686	78 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	NEIL1	Q96FI4	390 aa	Predicted RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	DPAGT1	Q9H3H5	408 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	MOB1A	Q9H8S9	216 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	ANKRD36	A6QL64	1941 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	LOC105371242	A0A075B767	164 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	EIF4E	P06730	217 aa	Known RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	CALCB	P10092	127 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	PF4V1	P10720	104 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	CTLA4	P16410	223 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	TGFBR2	P37173	567 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	LSM6	P62312	80 aa	Known RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	CLVS2	Q5SYC1	327 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	TMEM163	Q8TC26	289 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	STON2	Q8WXE9	905 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	POM121	Q96HA1	1249 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	ABHD6	Q9BV23	337 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	C20orf141	Q9NUB4	165 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	PITPNC1	Q9UKF7	332 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544		M0QZ24	198 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	NDUFA2	O43678	99 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	ZNF780A	O75290	641 aa	Predicted RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	WISP3	O95389	354 aa	Predicted RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	FAU	P35544	74 aa	Known RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	THOC7	Q6I9Y2	204 aa	Known RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	MAVS	Q7Z434	540 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	OR8H2	Q8N162	312 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	ZCCHC24	Q8N2G6	241 aa	Known RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	UTP4	Q969X6	686 aa	Known RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	C4orf36	Q96KX1	117 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	LURAP1	Q96LR2	239 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	ATG5	Q9H1Y0	275 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	SLC6A13	Q9NSD5	602 aa		7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	PURG	Q9UJV8	347 aa	Known RBP	7.38	□□□□□ -1.23
HCG18-238	ENST00000449544	GOSR1	O95249	250 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	APOA2	P02652	100 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	FAH	P16930	419 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	TUBG1	P23258	451 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	NUP62	P37198	522 aa	Predicted RBP	7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	PRRX1	P54821	245 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	IL13RA1	P78552	427 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	PSMA8	Q8TAA3	256 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	ASB10	Q8WXI3	467 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	C11orf24	Q96F05	449 aa	Predicted RBP	7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	OPALIN	Q96PE5	141 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	SLC5A7	Q9GZV3	580 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	TUBG2	Q9NRH3	451 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	SETX	Q7Z333	2677 aa	Known RBP	7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	C7orf72	A4D263	438 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	NPIPB8	E9PQR5	432 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	CDIPT	O14735	213 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	CLPTM1	O96005	669 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	GTF2F2	P13984	249 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	NR4A1	P22736	598 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	TMEM65	Q6PI78	240 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	WDFY1	Q8IWB7	410 aa		7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	DVL3	Q92997	716 aa	Predicted RBP	7.37	□□□□□ -1.23
HCG18-238	ENST00000449544	S1PR3	Q99500	378 aa		7.37	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms