RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 FAM3AP98173 230 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 KPNB1Q14974 876 aaKnown RBP10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 OR8G1Q15617 311 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 MPPED2Q15777 294 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 TIGD6Q17RP2 521 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 ZNF181Q2M3W8 571 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 TMEM155Q4W5P6 130 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 C12orf73Q69YU5 71 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 FAHD2BQ6P2I3 314 aaPredicted RBP10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 LRRN1Q6UXK5 716 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 KLHL36Q8N4N3 616 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 CELF2-AS1Q8N7Q2 184 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 TCEANCQ8N8B7 351 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 OR56B2PQ8NGI1 322 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 OR52H1Q8NGJ2 320 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 FAHD2AQ96GK7 314 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 REEP6Q96HR9 211 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 CIB1Q99828 191 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 OSBPL10Q9BXB5 764 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 YIPF3Q9GZM5 350 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 SLC22A4Q9H015 551 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 PATZ1Q9HBE1 687 aaKnown RBP10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 TMEM165Q9HC07 324 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 G6PC2Q9NQR9 355 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 MRPL15Q9P015 296 aaKnown RBP10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 OAZ3Q9UMX2 235 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 PCDHB10Q9UN67 800 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 DOCK11Q5JSL3 2073 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 SAC3D1A6NKF1 404 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 H3BNX3 289 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 EBAG9O00559 213 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 GMDSO60547 372 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 AVPP01185 164 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 MRPL3P09001 348 aaKnown RBP10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 ZFP36P26651 326 aaKnown RBP10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 THBS2P35442 1172 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 SRP14P37108 136 aaKnown RBP10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 DDOSTP39656 456 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 MDH2P40926 338 aaKnown RBP10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 RAD23AP54725 363 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 LCN2P80188 198 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 FAM201AQ5SY85 155 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 AADACL4Q5VUY2 407 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 PRAMEF6Q5VXH4 476 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 MEPCEQ7L2J0 689 aaKnown RBP10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 SPICQ8N5J4 248 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 TMEM163Q8TC26 289 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 DVL3Q92997 716 aaPredicted RBP10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 PGAM5Q96HS1 289 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 IL4I1Q96RQ9 567 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 PKP2Q99959 881 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 PRRG3Q9BZD7 231 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 OR10A2Q9H208 303 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 OPA3Q9H6K4 179 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 UFSP2Q9NUQ7 469 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 H2AFY2Q9P0M6 372 aaPredicted RBP10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 LAMP5Q9UJQ1 280 aa10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 NOP16Q9Y3C1 178 aaKnown RBP10.7□□□□□ -0.7
PRPF40A-203ENST00000448428 WNK2Q9Y3S1 2297 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 LRRC30A6NM36 301 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 PSMD9O00233 223 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 FAM20BO75063 409 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 PTBP3O95758 552 aaKnown RBP10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 PNPP00491 289 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 WNT2P09544 360 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 GSK3AP49840 483 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 SEC61A1P61619 476 aaKnown RBP10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 LCN1P1Q5VSP4 162 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 NXNL2Q5VZ03 156 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 C1orf229Q6ZS94 237 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 KRT77Q7Z794 578 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 Q8TCH9 128 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 ERGIC1Q969X5 290 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 ADAT1Q9BUB4 502 aaKnown RBP10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 PPP1R3EQ9H7J1 279 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 ENOPH1Q9UHY7 261 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 LRP12Q9Y561 859 aa10.69□□□□□ -0.7
PRPF40A-203ENST00000448428 PPIAL4EA0A075B759 164 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 A0A0G2JMP0 313 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 A0A0X1KG70 313 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 hCG_38984A0A1B0GV85 526 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 CEACAM18A8MTB9 384 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 PRR32B1ATL7 298 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 F5H0A9 414 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 PPIAL4DF5H284 164 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 PHF1O43189 567 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 FOXH1O75593 365 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 FSTL3O95633 263 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 GRPP07492 148 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 PPIAL4FP0DN26 164 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 IRF2P14316 349 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 CFL1P23528 166 aaKnown RBP10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 GFOD2Q3B7J2 385 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 ZFP1Q6P2D0 407 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 KCTD18Q6PI47 426 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 KLBQ86Z14 1044 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 C1orf87Q8N0U7 546 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 MUC20Q8N307 709 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 SPERTQ8NA61 448 aa10.68□□□□□ -0.7
PRPF40A-203ENST00000448428 PLPP7Q8NBV4 271 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms