RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 C3orf80F5H4A9 247 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 ZNF593O00488 134 aaPredicted RBP15.14■□□□□ 0.01
COL9A1-205ENST00000447041 GMDSO60547 372 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 PTBP3O95758 552 aaKnown RBP15.14■□□□□ 0.01
COL9A1-205ENST00000447041 FMO3P31513 532 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 MTNR1AP48039 350 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 FGF12P61328 243 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 PCK2Q16822 640 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 LCN8Q6JVE9 175 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 OR6K6Q8NGW6 343 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 SLC25A28Q96A46 364 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 KCNJ15Q99712 375 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 ZNF747Q9BV97 191 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 MAGIXQ9H6Y5 334 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 MRPL15Q9P015 296 aaKnown RBP15.14■□□□□ 0.01
COL9A1-205ENST00000447041 SAMHD1Q9Y3Z3 626 aaKnown RBP15.14■□□□□ 0.01
COL9A1-205ENST00000447041 ZNF878C9JN71 531 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 CLDN34H7C241 214 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 LGALS8O00214 317 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 SLC25A1P53007 311 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 TAF13Q15543 124 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 MICAQ29983 383 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 OR2T5Q6IEZ7 315 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 ZNF826PQ6ZT77 177 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 DHFR2Q86XF0 187 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 OR2T33Q8NG76 320 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 OR2T29Q8NH02 315 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 DGCR6LQ9BY27 220 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 REEP1Q9H902 201 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 SMURF1Q9HCE7 757 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 C1orf123Q9NWV4 160 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 BAIAP2Q9UQB8 552 aa15.13■□□□□ 0.01
COL9A1-205ENST00000447041 DHRS12A0PJE2 317 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 TMPRSS2O15393 492 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 TBX1O43435 398 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 XRCC2O43543 280 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 ENSAO43768 121 aaKnown RBP15.12■□□□□ 0.01
COL9A1-205ENST00000447041 GRPP07492 148 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 SFTPBP07988 381 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 MS4A2Q01362 244 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 EIF2B1Q14232 305 aaKnown RBP15.12■□□□□ 0.01
COL9A1-205ENST00000447041 OR8B8Q15620 311 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 DEFB112Q30KQ8 113 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 TEX30Q5JUR7 227 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 LINC01590Q5TEZ4 76 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 RUSC1-AS1Q66K80 236 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 NIPSNAP1Q9BPW8 284 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 MUC13Q9H3R2 512 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 OPA3Q9H6K4 179 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 MED20Q9H944 212 aa15.12■□□□□ 0.01
COL9A1-205ENST00000447041 OOEPA6NGQ2 149 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 FAM183AA6NL82 134 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 A6NLC8 198 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 ADAM20O43506 726 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 FCN3O75636 299 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 IFNGP01579 166 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 CX3CR1P49238 355 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 NPY4RP50391 375 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 MNAT1P51948 309 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 KCNJ8Q15842 424 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 SHISA2Q6UWI4 295 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 GCSAMQ8N6F7 178 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 IQCF1Q8N6M8 205 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 PLPP7Q8NBV4 271 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 OR10G2Q8NGC3 310 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 SPSB4Q96A44 273 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 PCGF1Q9BSM1 259 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 UNKLQ9H9P5 680 aaKnown RBP15.11■□□□□ 0.01
COL9A1-205ENST00000447041 CMC2Q9NRP2 79 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 ERVK-18Q9QC07 812 aa15.11■□□□□ 0.01
COL9A1-205ENST00000447041 TRRAPQ9Y4A5 3859 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 TRAV38-1A0A0B4J264 116 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 hCG_1807616A0A1W2PRN6 198 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 RIIAD1A6NNX1 92 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 TNFRSF13BO14836 293 aaPredicted RBP15.1■□□□□ 0.01
COL9A1-205ENST00000447041 HOXA3O43365 443 aaPredicted RBP15.1■□□□□ 0.01
COL9A1-205ENST00000447041 GYPAP02724 150 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 ANXA2P07355 339 aaKnown RBP15.1■□□□□ 0.01
COL9A1-205ENST00000447041 ZNF3P17036 446 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 CFHR2P36980 270 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 GRB2P62993 217 aaKnown RBP15.1■□□□□ 0.01
COL9A1-205ENST00000447041 TRIM25Q14258 630 aaKnown RBP15.1■□□□□ 0.01
COL9A1-205ENST00000447041 FAM98BQ52LJ0 330 aaKnown RBP15.1■□□□□ 0.01
COL9A1-205ENST00000447041 GPR157Q5UAW9 335 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 SLC16A9Q7RTY1 509 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 DPY19L4Q7Z388 723 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 WDR86Q86TI4 376 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 FAM90A1Q86YD7 464 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 ERI1Q8IV48 349 aaKnown RBP15.1■□□□□ 0.01
COL9A1-205ENST00000447041 ARHGAP24Q8N264 748 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 SPERTQ8NA61 448 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 OR6N2Q8NGY6 317 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 NSL1Q96IY1 281 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 AMELYQ99218 206 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 RASSF4Q9H2L5 321 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 DNAJC27Q9NZQ0 273 aa15.1■□□□□ 0.01
COL9A1-205ENST00000447041 IGHV3OR15-7A0A075B7D8 119 aa15.09■□□□□ 0.01
COL9A1-205ENST00000447041 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.09■□□□□ 0.01
COL9A1-205ENST00000447041 MMP9P14780 707 aa15.09■□□□□ 0.01
COL9A1-205ENST00000447041 HSD11B1P28845 292 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms