RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 SLC10A1Q14973 349 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 MOGAT2Q3SYC2 334 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 C1orf100Q5SVJ3 147 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 CHMP1BQ7LBR1 199 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 ZNF101Q8IZC7 436 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 MDS2Q8NDY4 140 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 FNDC9Q8TBE3 224 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 NPRL2Q8WTW4 380 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 LYZL4Q96KX0 146 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 GPER1Q99527 375 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 FOXB1Q99853 325 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 GPR35Q9HC97 309 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 SLC17A5Q9NRA2 495 aa8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 ELF5Q9UKW6 265 aaPredicted RBP8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 MCTS1Q9ULC4 181 aaKnown RBP8.36□□□□□ -1.07
COL6A4P1-201ENST00000446690 LOC390937A0A1W2PQ73 354 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 H7C417 338 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 LRP3O75074 770 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 ERCC1P07992 297 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 GTF2F2P13984 249 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 ZNF708P17019 499 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 ZNF32P17041 273 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 HTR2BP41595 481 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 RRADP55042 308 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 HIST1H3AP68431 136 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 SNAI3Q3KNW1 292 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 ZNF766Q5HY98 468 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 SFRP5Q5T4F7 317 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 HIST2H3PS2Q5TEC6 136 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 TSPO2Q5TGU0 170 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 HIST2H3AQ71DI3 136 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 PGAP1Q75T13 922 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 BTN2A1Q7KYR7 527 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 SLC16A14Q7RTX9 510 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 CCDC28AQ8IWP9 274 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 FAM109AQ8N4B1 249 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 CHST4Q8NCG5 386 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 PRSS33Q8NF86 280 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 OR14K1Q8NGZ2 314 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 GIMAP1Q8WWP7 306 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 DVL3Q92997 716 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 C20orf85Q9H1P6 137 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 MED28Q9H204 178 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 METTL17Q9H7H0 456 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 ING3Q9NXR8 418 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 MTFP1Q9UDX5 166 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 CSAG2Q9Y5P2 127 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 DOCK10Q96BY6 2186 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 CACNA1HO95180 2353 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 METTL21EPA6NDL7 271 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 NAP1L6A6NFF2 107 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 CST2P09228 141 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 CD37P11049 281 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 GABRA1P14867 456 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 PSMB1P20618 241 aaKnown RBP8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 M6PRP20645 277 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 OR3A3P47888 321 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 PRSS12P56730 875 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 GLIPR1L1Q6UWM5 242 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 LYPD6Q86Y78 171 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 SKA3Q8IX90 412 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 OR1F12Q8NHA8 337 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 FGFBP3Q8TAT2 258 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 CMBLQ96DG6 245 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 CITED4Q96RK1 184 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 UQCC2Q9BRT2 126 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 ZNF552Q9H707 407 aaPredicted RBP8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 ASCL3Q9NQ33 180 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 RAB22AQ9UL26 194 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 LIPGQ9Y5X9 500 aa8.35□□□□□ -1.07
COL6A4P1-201ENST00000446690 A0A096LPE4 126 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 A0A1W2PPZ6 126 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 SMLR1H3BR10 107 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 LDLRAD4O15165 306 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 APOC1P02654 83 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 LCATP04180 440 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 VSIG8P0DPA2 414 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 LIPCP11150 499 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 FAHP16930 419 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 OR3A4PP47883 348 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 HTR5AP47898 357 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 VEGFCP49767 419 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 PSG4Q00888 419 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 SCRN3Q0VDG4 424 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 RAB35Q15286 201 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 FCN2Q15485 313 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 GSG1Q2KHT4 349 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 ZNF782Q6ZMW2 699 aaPredicted RBP8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 PAQR4Q8N4S7 273 aaPredicted RBP8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 FDCSPQ8NFU4 85 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 OR4D10Q8NGI6 311 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 OR5D18Q8NGL1 313 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 OR56B4Q8NH76 319 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 OR2AE1Q8NHA4 323 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 HAS2Q92819 552 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 GON7Q9BXV9 100 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 OR10A2Q9H208 303 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 SLCO5A1Q9H2Y9 848 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 OR51J1Q9H342 316 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 NOX3Q9HBY0 568 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms