RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 NSG1A0A0A6YYJ2 146 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 A0A1W2PR48 441 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 C9orf135Q5VTT2 229 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 SIGLEC11Q96RL6 698 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 BARHL1Q9BZE3 327 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 NXF2Q9GZY0 626 aaKnown RBP16.87■□□□□ 0.29
SHANK3-203ENST00000445220 SLC17A5Q9NRA2 495 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 ZNF346Q9UL40 294 aaKnown RBP16.87■□□□□ 0.29
SHANK3-203ENST00000445220 A0A1B0GTL3 188 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 RFC3P40938 356 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 DPTQ07507 201 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 PNLIPRP3Q17RR3 467 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 AGBL5Q8NDL9 886 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 ZNF775Q96BV0 537 aaPredicted RBP16.87■□□□□ 0.29
SHANK3-203ENST00000445220 CHRDL1Q9BU40 450 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 SLC22A13Q9Y226 551 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 FCMRO60667 390 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 EIF1P41567 113 aaKnown RBP16.87■□□□□ 0.29
SHANK3-203ENST00000445220 ARHGEF39Q8N4T4 335 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 GPR32P1Q8NGA4 272 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 PLEKHB1Q9UF11 243 aaPredicted RBP16.87■□□□□ 0.29
SHANK3-203ENST00000445220 GABRA1P14867 456 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 DHRS2Q13268 280 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 RSRP1Q9BUV0 290 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 MAGT1Q9H0U3 335 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 PSENENQ9NZ42 101 aa16.87■□□□□ 0.29
SHANK3-203ENST00000445220 M0QZK8 103 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 TMPRSS11DO60235 418 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 GGCTO75223 188 aaKnown RBP16.86■□□□□ 0.29
SHANK3-203ENST00000445220 LIMS3P0CW19 117 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 LIMS4P0CW20 117 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 OPRM1P35372 400 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 CDONQ4KMG0 1287 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 N4BP2Q86UW6 1770 aaPredicted RBP16.86■□□□□ 0.29
SHANK3-203ENST00000445220 ZNF732B4DXR9 585 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 ETFDHQ16134 617 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 SAT2Q96F10 170 aaPredicted RBP16.86■□□□□ 0.29
SHANK3-203ENST00000445220 ZC3HAV1LQ96H79 300 aaKnown RBP16.86■□□□□ 0.29
SHANK3-203ENST00000445220 TLCD2A6NGC4 264 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 PRAMEF25A6NGN4 478 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 SLC31A2O15432 143 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 CCKARP32238 428 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 PMS2P11Q13670 270 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 NCMAPQ5T1S8 102 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 PRAMEF5Q5TYX0 476 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 PRAMEF6Q5VXH4 476 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 PINX1Q96BK5 328 aaKnown RBP16.86■□□□□ 0.29
SHANK3-203ENST00000445220 TCRBV16S1A1N1A0A5B0 115 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 ZNF426Q9BUY5 554 aa16.86■□□□□ 0.29
SHANK3-203ENST00000445220 DEGS1O15121 323 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 SLC25A4P12235 298 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 CDKN3Q16667 212 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 ASTLQ6HA08 431 aaPredicted RBP16.85■□□□□ 0.29
SHANK3-203ENST00000445220 CBLN2Q8IUK8 224 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 CIB3Q96Q77 187 aaPredicted RBP16.85■□□□□ 0.29
SHANK3-203ENST00000445220 MPC2O95563 127 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 NHLRC1Q6VVB1 395 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 TEX101Q9BY14 249 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 B3GAT1Q9P2W7 334 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 BOKQ9UMX3 212 aaPredicted RBP16.85■□□□□ 0.29
SHANK3-203ENST00000445220 ZNF814B7Z6K7 855 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 PMCHP20382 165 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 GSK3AP49840 483 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 NTNG2Q96CW9 530 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 ASB16Q96NS5 453 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 NPAS1Q99742 590 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 ADGRL4Q9HBW9 690 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 BET1LQ9NYM9 111 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 A0A1W2PPH5 198 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 PLPP2O43688 288 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 FZD6O60353 706 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 IAPPP10997 89 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 FPR2P25090 351 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 ZNF813Q6ZN06 617 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 KCND3Q9UK17 655 aa16.85■□□□□ 0.29
SHANK3-203ENST00000445220 AQP7O14520 342 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 SCRG1O75711 98 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 RPL18Q07020 188 aaKnown RBP16.84■□□□□ 0.29
SHANK3-203ENST00000445220 RSPO2Q6UXX9 243 aaPredicted RBP16.84■□□□□ 0.29
SHANK3-203ENST00000445220 ELSPBP1Q96BH3 223 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 SPACA5Q96QH8 159 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 SEC11CQ9BY50 192 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 DAPP1Q9UN19 280 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 TAF1P21675 1872 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 USP54Q70EL1 1684 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 TMEM202A6NGA9 273 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 OR4S1Q8NGB4 309 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 ZNRF4Q8WWF5 429 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 V9GYH0 126 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 CT45A10P0DMU9 189 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 GALR1P47211 349 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 PLA1AQ53H76 456 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 OR52N5Q8NH56 324 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 OR51F2Q8NH61 342 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 GPR84Q9NQS5 396 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 LIN7CQ9NUP9 197 aaKnown RBP16.84■□□□□ 0.29
SHANK3-203ENST00000445220 CD81P60033 236 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 SLC35E1Q96K37 410 aa16.84■□□□□ 0.29
SHANK3-203ENST00000445220 UBE2ZQ9H832 354 aaPredicted RBP16.84■□□□□ 0.29
SHANK3-203ENST00000445220 ARID1BQ8NFD5 2236 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms