RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 CPT2P23786 658 aa16.84■□□□□ 0.29
LRCH3-208ENST00000443727 PMELP40967 661 aa16.84■□□□□ 0.29
LRCH3-208ENST00000443727 TIGD6Q17RP2 521 aa16.84■□□□□ 0.29
LRCH3-208ENST00000443727 NLRC3Q7RTR2 1065 aa16.84■□□□□ 0.29
LRCH3-208ENST00000443727 OR56B2PQ8NGI1 322 aa16.84■□□□□ 0.29
LRCH3-208ENST00000443727 ZMYND19Q96E35 227 aaPredicted RBP16.84■□□□□ 0.29
LRCH3-208ENST00000443727 TMEM246Q9BRR3 403 aa16.84■□□□□ 0.29
LRCH3-208ENST00000443727 MRI1Q9BV20 369 aa16.84■□□□□ 0.29
LRCH3-208ENST00000443727 SSBP3Q9BWW4 388 aaPredicted RBP16.84■□□□□ 0.29
LRCH3-208ENST00000443727 DNAJC27Q9NZQ0 273 aa16.84■□□□□ 0.29
LRCH3-208ENST00000443727 OPN4Q9UHM6 478 aa16.84■□□□□ 0.29
LRCH3-208ENST00000443727 AUP1Q9Y679 476 aa16.84■□□□□ 0.29
LRCH3-208ENST00000443727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.83■□□□□ 0.28
LRCH3-208ENST00000443727 TCRBV3S1A0A5B6 114 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 TRAPPC2LH3BP13 241 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 FAM20BO75063 409 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 WNT2P09544 360 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 H2BFMP0C1H6 154 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 FPR2P25090 351 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 RPS7P62081 194 aaKnown RBP16.83■□□□□ 0.28
LRCH3-208ENST00000443727 GNB2P62879 340 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 MZT1Q08AG7 82 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 ZNF154Q13106 437 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 ARMCX4Q5H9R4 360 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 FAM201AQ5SY85 155 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 KLBQ86Z14 1044 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.83■□□□□ 0.28
LRCH3-208ENST00000443727 BOLLQ8N9W6 283 aaKnown RBP16.83■□□□□ 0.28
LRCH3-208ENST00000443727 SPERTQ8NA61 448 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 OR8B3Q8NGG8 313 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 Q8TCH9 128 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 RNF133Q8WVZ7 376 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 DVL3Q92997 716 aaPredicted RBP16.83■□□□□ 0.28
LRCH3-208ENST00000443727 NEIL1Q96FI4 390 aaPredicted RBP16.83■□□□□ 0.28
LRCH3-208ENST00000443727 OR8B2Q96RD0 313 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 JMJD8Q96S16 334 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 SUCNR1Q9BXA5 334 aa16.83■□□□□ 0.28
LRCH3-208ENST00000443727 POLR3KQ9Y2Y1 108 aaPredicted RBP16.83■□□□□ 0.28
LRCH3-208ENST00000443727 ARHGAP32A7KAX9 2087 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 ANKRD30BLA7E2S9 258 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 A8MXK9 166 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 GSC2O15499 205 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 ANOS1P23352 680 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 MPPED2Q15777 294 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 GFOD2Q3B7J2 385 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 ZNF404Q494X3 552 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 FAM57BQ71RH2 274 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 CPOQ8IVL8 374 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 TIGD4Q8IY51 512 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 PAPD5Q8NDF8 572 aaKnown RBP16.82■□□□□ 0.28
LRCH3-208ENST00000443727 DEFB108BQ8NET1 73 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 THEM6Q8WUY1 208 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 SLC6A7Q99884 636 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 CADM1Q9BY67 442 aaKnown RBP16.82■□□□□ 0.28
LRCH3-208ENST00000443727 MARCH7Q9H992 704 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 BRD7Q9NPI1 651 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 RNF7Q9UBF6 113 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 INSIG2Q9Y5U4 225 aa16.82■□□□□ 0.28
LRCH3-208ENST00000443727 PRODHO43272 600 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 TIPRLO75663 272 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 FSTL3O95633 263 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 GRPP07492 148 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 LYNP07948 512 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 ZNF12P17014 697 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 DDOSTP39656 456 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 RASSF2P50749 326 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 ZNF121P58317 390 aaPredicted RBP16.81■□□□□ 0.28
LRCH3-208ENST00000443727 CDK5Q00535 292 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 TMEM236Q5W0B7 351 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 BTNL3Q6UXE8 466 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 USP43Q70EL4 1123 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.81■□□□□ 0.28
LRCH3-208ENST00000443727 ZNF454Q8N9F8 522 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 C19orf18Q8NEA5 215 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 OR52H1Q8NGJ2 320 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 OR8S1Q8NH09 359 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 ZFAND2BQ8WV99 257 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 DNAJC9Q8WXX5 260 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 C22orf15Q8WYQ4 148 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 REEP6Q96HR9 211 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 PGAM5Q96HS1 289 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 AMELYQ99218 206 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 OR10A2Q9H208 303 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 PAPOLBQ9NRJ5 636 aaKnown RBP16.81■□□□□ 0.28
LRCH3-208ENST00000443727 C14orf119Q9NWQ9 140 aa16.81■□□□□ 0.28
LRCH3-208ENST00000443727 FBN3Q75N90 2809 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 A6NLC8 198 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 TRIM77I1YAP6 450 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 SELENOFO60613 162 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 CFL1P23528 166 aaKnown RBP16.8■□□□□ 0.28
LRCH3-208ENST00000443727 OPRL1P41146 370 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 NAA10P41227 235 aaPredicted RBP16.8■□□□□ 0.28
LRCH3-208ENST00000443727 PITPNBP48739 271 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 HILS1P60008 231 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 BNIP1Q12981 228 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 OR8B8Q15620 311 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 KCNJ8Q15842 424 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 SNAPC1Q16533 368 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 DCDC5Q6ZRR9 648 aa16.8■□□□□ 0.28
LRCH3-208ENST00000443727 RHOUQ7L0Q8 258 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms