RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 REEP6Q96HR9 211 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 IKZF2Q9UKS7 526 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 PCDHGB1Q9Y5G3 927 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 N6AMT1Q9Y5N5 214 aa12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 ZNF469Q96JG9 3925 aaPredicted RBP12.75□□□□□ -0.37
CSNK1E-210ENST00000442216 A0A0U1RQV5 110 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 hCG_38984A0A1B0GV85 526 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 TMEM269A0A1B0GVZ9 245 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 IFNL4K9M1U5 179 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 MLNRO43193 412 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 GMDSO60547 372 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 CDC14BO60729 498 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 SULT1C4O75897 302 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 LY6G6DO95868 133 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 CHN2P52757 468 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 ACTC1P68032 377 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 ACTA1P68133 377 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 FAM3AP98173 230 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 SPERTQ8NA61 448 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 MAPK1IP1LQ8NDC0 245 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 BHLHE23Q8NDY6 225 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 CSNK2A3Q8NEV1 391 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 HPS1Q92902 700 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 OR2V2Q96R30 315 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 VCXQ9H320 206 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 GSX1Q9H4S2 264 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 MOB1AQ9H8S9 216 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 BRD7Q9NPI1 651 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 FAM206AQ9NX38 181 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 ZNF319Q9P2F9 582 aa12.74□□□□□ -0.37
CSNK1E-210ENST00000442216 VPS13CQ709C8 3753 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 IGHV4-61A0A0C4DH41 118 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 A0A1W2PQL4 384 aaPredicted RBP12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 PRR32B1ATL7 298 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 CLDN25C9JDP6 229 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 PSMD9O00233 223 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 LILRA1O75019 489 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 KRT8P05787 483 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 CD200P41217 278 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 GATA4P43694 442 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 SLC34A1Q06495 639 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 IL18R1Q13478 541 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 OR8B8Q15620 311 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 TMEM249Q2WGJ8 235 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 ZNF684Q5T5D7 378 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 FTMTQ8N4E7 242 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 DHRSXQ8N5I4 330 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 RFLNBQ8N5W9 214 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 SETD9Q8NE22 299 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 OR10H4Q8NGA5 316 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 OR8B12Q8NGG6 310 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 OR56B2PQ8NGI1 322 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 ITLN1Q8WWA0 313 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 ERGIC1Q969X5 290 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 RNFT2Q96EX2 444 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 TIMD4Q96H15 378 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 MEGF10Q96KG7 1140 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 MYCBPQ99417 103 aaPredicted RBP12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 SMR3AQ99954 134 aa12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 NUFIP1Q9UHK0 495 aaKnown RBP12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 MRM2Q9UI43 246 aaKnown RBP12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 EXOGQ9Y2C4 368 aaKnown RBP12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 TEP1Q99973 2627 aaKnown RBP12.73□□□□□ -0.37
CSNK1E-210ENST00000442216 ANKRD30BLA7E2S9 258 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 H0YAE9 185 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 H0YL77 283 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 J3QRE1 110 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 PPIHO43447 177 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 CD5LO43866 347 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 SRSF10O75494 262 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 ATP6V1B1P15313 513 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 GSK3AP49840 483 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 GZMKP49863 264 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 PRSS12P56730 875 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 ADARB1P78563 741 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 KRTAP1-1Q07627 177 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 MZT1Q08AG7 82 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 OR8G1Q15617 311 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 ZNF181Q2M3W8 571 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 SPRNQ5BIV9 151 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 ZNF691Q5VV52 312 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 PLEKHG7Q6ZR37 379 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 SSX6Q7RTT6 188 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 PEG10Q86TG7 708 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 EGFL6Q8IUX8 553 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 PLPP7Q8NBV4 271 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 OR10AD1Q8NGE0 317 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 CCL17Q92583 94 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 RAB1CQ92928 201 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 TTTY10Q9BZA0 68 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 PBOV1Q9GZY1 135 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 RNPEPL1Q9HAU8 725 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 MRPS18AQ9NVS2 196 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 PPP1R3CQ9UQK1 317 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 RPL36Q9Y3U8 105 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 SNX5Q9Y5X3 404 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 R4GMQ9 66 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 HSPE1-MOB4S4R3N1 261 aa12.72□□□□□ -0.37
CSNK1E-210ENST00000442216 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.71□□□□□ -0.376e-7■■□□□ 13.4
CSNK1E-210ENST00000442216 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms