RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 OR8B2Q96RD0 313 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 ADAT1Q9BUB4 502 aaKnown RBP16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 CHID1Q9BWS9 393 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 MRPL15Q9P015 296 aaKnown RBP16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 KIR2DS1A0A191URI9 304 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 ARRDC5A6NEK1 342 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 ZNF3P17036 446 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 GRK5P34947 590 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 PSMB10P40306 273 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 TAF13Q15543 124 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 ZNF841Q6ZN19 808 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 C19orf18Q8NEA5 215 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 GIPC3Q8TF64 312 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 SPSB4Q96A44 273 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 UPRTQ96BW1 309 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 LRGUKQ96M69 825 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 OPA3Q9H6K4 179 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 MED20Q9H944 212 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 FN3KRPQ9HA64 309 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 RNF7Q9UBF6 113 aa16.94■□□□□ 0.3
NCKIPSD-206ENST00000439518 FAM183AA6NL82 134 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 PHYHO14832 338 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 XRCC2O43543 280 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 CST1P01037 141 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 GRB2P62993 217 aaKnown RBP16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 HOXA4Q00056 320 aaPredicted RBP16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 WDR25Q64LD2 544 aaPredicted RBP16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 BTNL3Q6UXE8 466 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 RBMS3Q6XE24 437 aaKnown RBP16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 SPATC1Q76KD6 591 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 DPY19L4Q7Z388 723 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 IQCF1Q8N6M8 205 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 SPERTQ8NA61 448 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 OR56B2PQ8NGI1 322 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 TEX47Q8TBZ9 253 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 RNF133Q8WVZ7 376 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 ABHD6Q9BV23 337 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 MARCH7Q9H992 704 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 CLN8Q9UBY8 286 aa16.93■□□□□ 0.3
NCKIPSD-206ENST00000439518 LGALS8O00214 317 aa16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 IGHV4-38-2P0DP08 117 aa16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 SLC15A1P46059 708 aa16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 EIF2B1Q14232 305 aaKnown RBP16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 C9orf139Q6ZV77 190 aa16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 PRSS45Q7RTY3 260 aa16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 TMEM179BQ7Z7N9 219 aa16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 CANT1Q8WVQ1 401 aa16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 C1orf147Q96MC9 270 aaPredicted RBP16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 ZNF48Q96MX3 618 aaPredicted RBP16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 INTS14Q96SY0 518 aa16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 THTPAQ9BU02 230 aa16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 TOR3AQ9H497 397 aa16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 N6AMT1Q9Y5N5 214 aa16.92■□□□□ 0.3
NCKIPSD-206ENST00000439518 AQP12BA6NM10 295 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 H3BN98 237 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 TNFRSF13BO14836 293 aaPredicted RBP16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 PLATP00750 562 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 PRTN3P24158 256 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 GSTT1P30711 240 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 DDOSTP39656 456 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 CX3CR1P49238 355 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 RHOUQ7L0Q8 258 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 ERI1Q8IV48 349 aaKnown RBP16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 AQP12AQ8IXF9 295 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 TIGD4Q8IY51 512 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 PARP8Q8N3A8 854 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 C3orf56Q8N813 242 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 OR6N2Q8NGY6 317 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 AMELYQ99218 206 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 NUDT16L1Q9BRJ7 211 aaKnown RBP16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 MGAM2Q2M2H8 2515 aa16.91■□□□□ 0.3
NCKIPSD-206ENST00000439518 DNAJC9-AS1A6NH13 148 aa16.9■□□□□ 0.3
NCKIPSD-206ENST00000439518 GLCEO94923 617 aa16.9■□□□□ 0.3
NCKIPSD-206ENST00000439518 FAM3AP98173 230 aa16.9■□□□□ 0.3
NCKIPSD-206ENST00000439518 SLC16A9Q7RTY1 509 aa16.9■□□□□ 0.3
NCKIPSD-206ENST00000439518 SGK3Q96BR1 496 aa16.9■□□□□ 0.3
NCKIPSD-206ENST00000439518 MS4A7Q9GZW8 240 aaPredicted RBP16.9■□□□□ 0.3
NCKIPSD-206ENST00000439518 C1orf123Q9NWV4 160 aa16.9■□□□□ 0.3
NCKIPSD-206ENST00000439518 CTSZQ9UBR2 303 aa16.9■□□□□ 0.3
NCKIPSD-206ENST00000439518 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 C22orf46C9J442 243 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 TBX1O43435 398 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 APOC1P02654 83 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 GRPP07492 148 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 HOXB6P17509 224 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 HSD11B1P28845 292 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 OPRL1P41146 370 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 GINS1Q14691 196 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 KCNJ8Q15842 424 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 AWAT1Q58HT5 328 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 SFRP4Q6FHJ7 346 aaPredicted RBP16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 ZNF826PQ6ZT77 177 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 SHFQ7M4L6 423 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 GCSAMQ8N6F7 178 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 BOLLQ8N9W6 283 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 OR52H1Q8NGJ2 320 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 OTULINQ96BN8 352 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 SP140LQ9H930 580 aa16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 ZMAT3Q9HA38 289 aaKnown RBP16.89■□□□□ 0.29
NCKIPSD-206ENST00000439518 C14orf119Q9NWQ9 140 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms