RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 XRCC2O43543 280 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 IGHV4-38-2P0DP08 117 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 SLC2A1P11166 492 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 HSD11B1P28845 292 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 PAX2Q02962 417 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 TRIM25Q14258 630 aaKnown RBP15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 WDR25Q64LD2 544 aaPredicted RBP15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 LYPD2Q6UXB3 125 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 SPATC1Q76KD6 591 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 SPERTQ8NA61 448 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 PLPP7Q8NBV4 271 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 OR4Q3Q8NH05 313 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 OTULINQ96BN8 352 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 UPRTQ96BW1 309 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 DGCR6LQ9BY27 220 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 TENM1Q9UKZ4 2725 aa15.4■□□□□ 0.06
AC004540.1-201ENST00000439120 DOCK11Q5JSL3 2073 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 KIR2DS1A0A191URI9 304 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 hCG_1807616A0A1W2PRN6 198 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 ENSAO43768 121 aaKnown RBP15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 ANXA2P07355 339 aaKnown RBP15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 GRPP07492 148 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 HKR1P10072 659 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 PSKH1P11801 424 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 CALB2P22676 271 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 NPY4RP50391 375 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 GRB2P62993 217 aaKnown RBP15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 EIF2B1Q14232 305 aaKnown RBP15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 TEX30Q5JUR7 227 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 CD276Q5ZPR3 534 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 SFRP4Q6FHJ7 346 aaPredicted RBP15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 OR10G2Q8NGC3 310 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 OR56B2PQ8NGI1 322 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 OR8S1Q8NH09 359 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 ZNF48Q96MX3 618 aaPredicted RBP15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 NMNAT2Q9BZQ4 307 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 SP140LQ9H930 580 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 C14orf119Q9NWQ9 140 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 C1orf123Q9NWV4 160 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 VNN3Q9NY84 501 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 KIF17Q9P2E2 1029 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 ERVK-18Q9QC07 812 aa15.39■□□□□ 0.05
AC004540.1-201ENST00000439120 TRAV38-1A0A0B4J264 116 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 ANKRD30BLA7E2S9 258 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 C3orf80F5H4A9 247 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 H3BN98 237 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 LGALS8O00214 317 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 SPRY1O43609 319 aaPredicted RBP15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 APOC1P02654 83 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 RAP2AP10114 183 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 CLUP10909 449 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 DDOSTP39656 456 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 CX3CR1P49238 355 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 PCK2Q16822 640 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 TIGD6Q17RP2 521 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 ERI1Q8IV48 349 aaKnown RBP15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 OR6N2Q8NGY6 317 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 CCDC124Q96CT7 223 aaKnown RBP15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 CCT8L2Q96SF2 557 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 INTS14Q96SY0 518 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 TOR3AQ9H497 397 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 CMC2Q9NRP2 79 aa15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 PRPF19Q9UMS4 504 aaKnown RBP15.38■□□□□ 0.05
AC004540.1-201ENST00000439120 DHRS12A0PJE2 317 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 C5orf63A6NC05 138 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 GNGT2O14610 69 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 ADAM20O43506 726 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 PLATP00750 562 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 RNASE1P07998 156 aaKnown RBP15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 PAICSP22234 425 aaKnown RBP15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 FGF12P61328 243 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 GK3PQ14409 553 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 TUSC1Q2TAM9 212 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 GPR157Q5UAW9 335 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 C9orf139Q6ZV77 190 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 CCDC197Q8NCU1 140 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 ASB9Q96DX5 294 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 PCDHGB1Q9Y5G3 927 aa15.37■□□□□ 0.05
AC004540.1-201ENST00000439120 OOEPA6NGQ2 149 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 NDUFA2O43678 99 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 PTBP3O95758 552 aaKnown RBP15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 CST1P01037 141 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 GSTT1P30711 240 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 GRK5P34947 590 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 PSMB10P40306 273 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 HOXA4Q00056 320 aaPredicted RBP15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 MS4A2Q01362 244 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 GFOD2Q3B7J2 385 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 ZNF841Q6ZN19 808 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 DPY19L4Q7Z388 723 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 GIPC3Q8TF64 312 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 ZDHHC16Q969W1 377 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 DACT3Q96B18 629 aaPredicted RBP15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 REEP6Q96HR9 211 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 NIPSNAP1Q9BPW8 284 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 PCGF1Q9BSM1 259 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 MED20Q9H944 212 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 DNAJC27Q9NZQ0 273 aa15.36■□□□□ 0.05
AC004540.1-201ENST00000439120 FAM183AA6NL82 134 aa15.35■□□□□ 0.05
AC004540.1-201ENST00000439120 C22orf46C9J442 243 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms