RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 CXCL10P02778 98 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 CD63P08962 238 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 NDUFB7P17568 137 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 EMP2P54851 167 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 FOXL2P58012 376 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 AVL9Q8NBF6 648 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 NT5CQ8TCD5 201 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 TIMM29Q9BSF4 260 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 HRASLS2Q9NWW9 162 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 A0A1B0GTQ1 180 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 RAMP1O60894 148 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 DIRAS3O95661 229 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 CSTBP04080 98 aaKnown RBP11.92□□□□□ -0.5
ACTN1-204ENST00000438964 MDKP21741 143 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-204ENST00000438964 FCGR2CP31995 323 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 SP6Q3SY56 376 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 RNF212Q495C1 297 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 PRSS54Q6PEW0 395 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 BTNL8Q6UX41 500 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 C17orf78Q8N4C9 275 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 NAXEQ8NCW5 288 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 WFIKKN2Q8TEU8 576 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 HHLA2Q9UM44 414 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 FLVCR1Q9Y5Y0 555 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 TMEM14AQ9Y6G1 99 aa11.92□□□□□ -0.5
ACTN1-204ENST00000438964 CEP290O15078 2479 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 ASXL3Q9C0F0 2248 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 IGKV1D-43A0A0B4J1Z2 117 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 DBX1A6NMT0 343 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 ZNF10P21506 573 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-204ENST00000438964 DVL1P1P54792 670 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-204ENST00000438964 TMEM33P57088 247 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 ARFRP1Q13795 201 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 NFATC4Q14934 902 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 IAH1Q2TAA2 248 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-204ENST00000438964 TMEM244Q5VVB8 128 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 ASB13Q8WXK3 278 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 SGK3Q96BR1 496 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 LRFN5Q96NI6 719 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 OR2M4Q96R27 311 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 HDAC8Q9BY41 377 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 OR10A5Q9H207 317 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 OR52A1Q9UKL2 312 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 A0A0A6YYD4 124 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 CCDC163A0A0D9SF12 145 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 MFNGO00587 321 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 CELA2BP08218 269 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-204ENST00000438964 KLK2P20151 261 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 TSC22D1Q15714 1073 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 GUK1Q16774 197 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 TMEM128Q5BJH2 165 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 PLAC9Q5JTB6 97 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 WBP2NLQ6ICG8 309 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 SPNS3Q6ZMD2 512 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 CATSPERDQ86XM0 798 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 TERB2Q8NHR7 220 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 OCSTAMPQ9BR26 566 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 OR8D2Q9GZM6 311 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 TIMM10BQ9Y5J6 103 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 SHANK1Q9Y566 2161 aa11.91□□□□□ -0.5
ACTN1-204ENST00000438964 HKR1P10072 659 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 SERPINA2P20848 420 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 CXCR1P25024 350 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 RPL12P30050 165 aaKnown RBP11.9□□□□□ -0.5
ACTN1-204ENST00000438964 NUDT22Q9BRQ3 303 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 EMC6Q9BV81 110 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 NMES1Q9C002 83 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 TCEAL2Q9H3H9 227 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-204ENST00000438964 SLC17A4Q9Y2C5 497 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 UNC13CQ8NB66 2214 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 NPIPB9F8W1W9 429 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 LDLRAD4O15165 306 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 TNFSF12O43508 249 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 FGF19O95750 216 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 SLC35E2P0CK97 266 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 FOLR2P14207 255 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 PPM1AP35813 382 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 PPP1CCP36873 323 aaKnown RBP11.9□□□□□ -0.5
ACTN1-204ENST00000438964 ZNF141Q15928 474 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 HIST2H3AQ71DI3 136 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 ZDHHC22Q8N966 263 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 ARHGAP5-AS1Q96IT6 56 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 GPX7Q96SL4 187 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-204ENST00000438964 PNO1Q9NRX1 252 aaKnown RBP11.9□□□□□ -0.5
ACTN1-204ENST00000438964 PARPBPQ9NWS1 579 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 MED29Q9NX70 200 aa11.9□□□□□ -0.5
ACTN1-204ENST00000438964 PRSS37A4D1T9 235 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 K7EPK0 472 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 FOSL1P15407 271 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 HLA-GP17693 338 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 IGFBP3P17936 291 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 OR3A4PP47883 348 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 DHPSP49366 369 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 P2RY4P51582 365 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 SSBP1Q04837 148 aaKnown RBP11.89□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF674Q2M3X9 581 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 TSPO2Q5TGU0 170 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 ZNF529Q6P280 563 aa11.89□□□□□ -0.51
ACTN1-204ENST00000438964 SSX9Q7RTT3 188 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms