RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 SERPINE3A8MV23 424 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 E5RGE8 158 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 TAGLN2P37802 199 aaKnown RBP14.31□□□□□ -0.12
PTPN13-204ENST00000436978 SCARB1Q8WTV0 552 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 MED29Q9NX70 200 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 NSG2Q9Y328 171 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 STRAPQ9Y3F4 350 aaKnown RBP14.31□□□□□ -0.12
PTPN13-204ENST00000436978 ZFP92A6NM28 416 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 TRAPPC2P0DI81 140 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 TRAPPC2BP0DI82 140 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 GUSBP11Q6P575 273 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 STAC2Q6ZMT1 411 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 OR52I2Q8NH67 350 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 PIGMQ9H3S5 423 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 ST3GAL6Q9Y274 331 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 ZNF485Q8NCK3 441 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 A4GNTQ9UNA3 340 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 ZNF354AO60765 605 aaPredicted RBP14.31□□□□□ -0.12
PTPN13-204ENST00000436978 TRAT1Q6PIZ9 186 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 RNF165Q6ZSG1 346 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 PRSS45Q7RTY3 260 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 M1APQ8TC57 530 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 SFT2D1Q8WV19 159 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 ATF1P18846 271 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 SLC25A1P53007 311 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 UBE2IP63279 158 aaKnown RBP14.31□□□□□ -0.12
PTPN13-204ENST00000436978 B4GALNT1Q00973 533 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 RAB35Q15286 201 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 Q6ZS52 159 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 M0QZ24 198 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 ANKRD37Q7Z713 158 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 ANKRD53Q8N9V6 530 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 PLA2G2FQ9BZM2 168 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 B9D1Q9UPM9 204 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 NRXN2Q9P2S2 1712 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 F5P12259 2224 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 TMEM11P17152 192 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 MDH2P40926 338 aaKnown RBP14.31□□□□□ -0.12
PTPN13-204ENST00000436978 BATFQ16520 125 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 C2orf76Q3KRA6 126 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 PLA1AQ53H76 456 aa14.31□□□□□ -0.12
PTPN13-204ENST00000436978 ACTR3CQ9C0K3 210 aaPredicted RBP14.31□□□□□ -0.12
PTPN13-204ENST00000436978 ARPC3O15145 178 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 GPR37O15354 613 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 MT-CO3P00414 261 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 CISD3P0C7P0 127 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 HRH1P35367 487 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 DDOSTP39656 456 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 ADIRFQ15847 76 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 DTWD2Q8NBA8 298 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 SLC35B4Q969S0 331 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 MARC2Q969Z3 335 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 VN1R1Q9GZP7 353 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 MYOZ1Q9NP98 299 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-204ENST00000436978 FCMRO60667 390 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 IGFBP6P24592 240 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-204ENST00000436978 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-204ENST00000436978 BAGE3Q86Y29 109 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 BAGE2Q86Y30 109 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 SUCNR1Q9BXA5 334 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 TNFSF14O43557 240 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 CLEC2LP0C7M8 214 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 NPEPL1Q8NDH3 523 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 LILRB4Q8NHJ6 448 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 GPR87Q9BY21 358 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 H2AFB1P0C5Y9 115 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 ELLP55199 621 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-204ENST00000436978 WDR74Q6RFH5 385 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-204ENST00000436978 UBE2FQ969M7 185 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 ZDHHC16Q969W1 377 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 SLCO1C1Q9NYB5 712 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 TMEM30CPA0ZSE6 113 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 MBTPS2O43462 519 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 OR10R2Q8NGX6 335 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 CNRIP1Q96F85 164 aaPredicted RBP14.3□□□□□ -0.12
PTPN13-204ENST00000436978 LALBAP00709 142 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 CD82P27701 267 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 MEOX1P50221 254 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 FCN2Q15485 313 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 OR10P1Q8NGE3 313 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 FBXO8Q9NRD0 319 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 AK3Q9UIJ7 227 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 SBF1O95248 1867 aa14.3□□□□□ -0.12
PTPN13-204ENST00000436978 ACKR3P25106 362 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 TAF9Q16594 264 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 SLC36A1Q7Z2H8 476 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 C12orf10Q9HB07 376 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 DHHO43323 396 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 MOB1BQ7L9L4 216 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 BATF2Q8N1L9 274 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 KCNRGQ8N5I3 272 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 HSD17B11Q8NBQ5 300 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 OR2G2Q8NGZ5 317 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 XRCC3O43542 346 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 KIRREL2Q6UWL6 708 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 CMTM3Q96MX0 182 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 GABRG3Q99928 467 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 IGHV1OR15-9A0A0B4J2B8 117 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 TBX19O60806 448 aa14.29□□□□□ -0.12
PTPN13-204ENST00000436978 KIR2DS2P43631 304 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms