RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 TMPRSS11FQ6ZWK6 438 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 CMTM4Q8IZR5 234 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 Q8N7P7 452 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 FAM156AQ8NDB6 213 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 LY6G5BQ8NDX9 201 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 NPRL2Q8WTW4 380 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 TSPEARQ8WU66 669 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 C17orf50Q8WW18 174 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 CFHR4Q92496 578 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 RORBQ92753 470 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 SEH1LQ96EE3 360 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 ATF6BQ99941 703 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 SH3GL1Q99961 368 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 SLC22A4Q9H015 551 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 NRIP3Q9NQ35 241 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 RAB21Q9UL25 225 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 NOP16Q9Y3C1 178 aaKnown RBP12.12□□□□□ -0.47
HDAC8-213ENST00000436675 N6AMT1Q9Y5N5 214 aa12.12□□□□□ -0.47
HDAC8-213ENST00000436675 FXYD1O00168 92 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 PTP4A3O75365 173 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 PTBP3O95758 552 aaKnown RBP12.11□□□□□ -0.47
HDAC8-213ENST00000436675 PAX6P26367 422 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 TPTEP56180 551 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 PCK2Q16822 640 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 PGM2L1Q6PCE3 622 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 ADCK1Q86TW2 530 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 OR8J3Q8NGG0 315 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 OR4C13Q8NGP0 309 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 OR2AJ1Q8NGZ0 328 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 LRRC29Q8WV35 223 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 H1FXQ92522 213 aaKnown RBP12.11□□□□□ -0.47
HDAC8-213ENST00000436675 PHF21AQ96BD5 680 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 SSX3Q99909 188 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 MMP28Q9H239 520 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 GMPR2Q9P2T1 348 aaKnown RBP12.11□□□□□ -0.47
HDAC8-213ENST00000436675 KAAG1Q9UBP8 84 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 B9D1Q9UPM9 204 aa12.11□□□□□ -0.47
HDAC8-213ENST00000436675 IGLV1-36A0A0B4J1U3 117 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 XPNPEP2O43895 674 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 PPP1R3DO95685 299 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 ZNF682O95780 498 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 LHBP01229 141 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 SELLP14151 372 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 CRABP1P29762 137 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 KIR2DS4P43632 304 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 GMFBP60983 142 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 ECH1Q13011 328 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 MICBQ29980 383 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 GLYATL3Q5SZD4 288 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 TEX36Q5VZQ5 186 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 DNM1P34Q6PK57 102 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 METAP1DQ6UB28 335 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-213ENST00000436675 TSEN54Q7Z6J9 526 aaKnown RBP12.1□□□□□ -0.47
HDAC8-213ENST00000436675 OR6V1Q8N148 313 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 SPERTQ8NA61 448 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 PLPP7Q8NBV4 271 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 SLC26A10Q8NG04 563 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 OR5T2Q8NGG2 359 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 OR2T6Q8NHC8 308 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 DYDC1Q8WWB3 177 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 R3HDM4Q96D70 268 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 RSRC1Q96IZ7 334 aaKnown RBP12.1□□□□□ -0.47
HDAC8-213ENST00000436675 CLPTM1LQ96KA5 538 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 TMEM120AQ9BXJ8 343 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 NSRP1Q9H0G5 558 aaKnown RBP12.1□□□□□ -0.47
HDAC8-213ENST00000436675 FN3KQ9H479 309 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 PNRC2Q9NPJ4 139 aaKnown RBP12.1□□□□□ -0.47
HDAC8-213ENST00000436675 SIGLEC7Q9Y286 467 aa12.1□□□□□ -0.47
HDAC8-213ENST00000436675 DNAH9Q9NYC9 4486 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.09□□□□□ -0.47
HDAC8-213ENST00000436675 FAM220BPB1ANY3 271 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 M0R135 149 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 ACOT8O14734 319 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 MRASO14807 208 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 NDUFB3O43676 98 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 HLA-DQA2P01906 255 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 TFF1P04155 84 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 CD28P10747 220 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 FXYD6P3P58550 94 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 RFX4Q33E94 735 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 C11orf91Q3C1V1 193 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 FOXB2Q5VYV0 432 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 OR2T12Q8NG77 320 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 OR4S1Q8NGB4 309 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 OR56B2PQ8NGI1 322 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 TNFRSF14Q92956 283 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 ZNF799Q96GE5 643 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 ERMAPQ96PL5 475 aaPredicted RBP12.09□□□□□ -0.47
HDAC8-213ENST00000436675 GPX7Q96SL4 187 aaPredicted RBP12.09□□□□□ -0.47
HDAC8-213ENST00000436675 NMNAT3Q96T66 252 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 NKX3-1Q99801 234 aaPredicted RBP12.09□□□□□ -0.47
HDAC8-213ENST00000436675 PRPF19Q9UMS4 504 aaKnown RBP12.09□□□□□ -0.47
HDAC8-213ENST00000436675 TMEM5Q9Y2B1 443 aa12.09□□□□□ -0.47
HDAC8-213ENST00000436675 BHLHE40O14503 412 aa12.08□□□□□ -0.48
HDAC8-213ENST00000436675 FBXO24O75426 580 aa12.08□□□□□ -0.48
HDAC8-213ENST00000436675 TROVE2P10155 538 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDAC8-213ENST00000436675 RPS27P42677 84 aaKnown RBP12.08□□□□□ -0.48
HDAC8-213ENST00000436675 RPS6KA3P51812 740 aa12.08□□□□□ -0.48
HDAC8-213ENST00000436675 CSNK2BP67870 215 aa12.08□□□□□ -0.48
HDAC8-213ENST00000436675 SLC36A3Q495N2 470 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms