RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 SPSB4Q96A44 273 aa9.04□□□□□ -0.96
SPTLC1P4-201ENST00000435997 TRIM15Q9C019 465 aa9.04□□□□□ -0.96
SPTLC1P4-201ENST00000435997 GORASP2Q9H8Y8 452 aa9.04□□□□□ -0.96
SPTLC1P4-201ENST00000435997 SPAG4Q9NPE6 437 aa9.04□□□□□ -0.96
SPTLC1P4-201ENST00000435997 TNFRSF19Q9NS68 423 aa9.04□□□□□ -0.96
SPTLC1P4-201ENST00000435997 KIF17Q9P2E2 1029 aa9.04□□□□□ -0.96
SPTLC1P4-201ENST00000435997 A0A0U1RQK1 487 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 BHLHE40O14503 412 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 TIMM23O14925 209 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 ADAM20O43506 726 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 GPR137BO60478 399 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 CCDC22O60826 627 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 IGHV4-59P01825 116 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 IER3P46695 156 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 PSME3P61289 254 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 SPIBQ01892 262 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 OR8B8Q15620 311 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 METTL11BQ5VVY1 283 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 GLYATQ6IB77 296 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 METAP1DQ6UB28 335 aaPredicted RBP9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 LYPD4Q6UWN0 246 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 ZNF826PQ6ZT77 177 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 WDR86Q86TI4 376 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 SPERTQ8NA61 448 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 OR56B2PQ8NGI1 322 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 ZNRF4Q8WWF5 429 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 SPTSSAQ969W0 71 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 RBM4BQ9BQ04 359 aaKnown RBP9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 IFT27Q9BW83 186 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 MYLK2Q9H1R3 596 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 OPA3Q9H6K4 179 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 ARGLU1Q9NWB6 273 aaPredicted RBP9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 CD300AQ9UGN4 299 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 RPUSD1Q9UJJ7 312 aaKnown RBP9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 RNF114Q9Y508 228 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 KPTNQ9Y664 436 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 COMMD3-BMI1R4GMX3 469 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 CMYA5Q8N3K9 4069 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 TGP01266 2768 aa9.03□□□□□ -0.96
SPTLC1P4-201ENST00000435997 A0A1B0GVI7 797 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 DVL1O14640 695 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 OR10H3O60404 316 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 GADD45GO95257 159 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 ECDO95905 644 aaPredicted RBP9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 GYPAP02724 150 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 NOS3P29474 1203 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 RPS27P42677 84 aaKnown RBP9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 SMIM11AP58511 58 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 TSPAN31Q12999 210 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 TAF9Q16594 264 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 CDONQ4KMG0 1287 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 PGBD2Q6P3X8 592 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 BTN2A1Q7KYR7 527 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 ZDHHC21Q8IVQ6 265 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 C11orf53Q8IXP5 236 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 ZSCAN4Q8NAM6 433 aaPredicted RBP9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 LY6G5BQ8NDX9 201 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 OR4C15Q8NGM1 316 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 TBC1D15Q8TC07 691 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 PYURFQ96I23 114 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 DMRTB1Q96MA1 342 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 C16orf95Q9H693 158 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 C1orf123Q9NWV4 160 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 CDH10Q9Y6N8 788 aa9.02□□□□□ -0.97
SPTLC1P4-201ENST00000435997 A0A1B0GW55 424 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 GGT3PA6NGU5 568 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 SLC22A31A6NKX4 558 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 TSPAN15O95858 294 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 HLA-DQA2P01906 255 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 DUX4L2P0CJ85 424 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 DUX4L3P0CJ86 424 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 DUX4L4P0CJ87 422 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 DUX4L5P0CJ88 424 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 DUX4L6P0CJ89 424 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 DUX4L7P0CJ90 424 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 HSD17B1P14061 328 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 MUC1P15941 1255 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 PYCR1P32322 319 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 IFNGR2P38484 337 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 KRT72Q14CN4 511 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 DUX4L9Q6RFH8 374 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 Q6ZSV7 163 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 PRSS45Q7RTY3 260 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 DCXRQ7Z4W1 244 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 FGFRL1Q8N441 504 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 BOLLQ8N9W6 283 aaKnown RBP9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 CYB561A3Q8NBI2 242 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 OR2T4Q8NH00 348 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 LHX4Q969G2 390 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 C12orf43Q96C57 262 aaKnown RBP9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 CCT8L2Q96SF2 557 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 KCNJ15Q99712 375 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 BTBD10Q9BSF8 475 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 COPS4Q9BT78 406 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 NMNAT2Q9BZQ4 307 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 NSRP1Q9H0G5 558 aaKnown RBP9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 TLNRD1Q9H1K6 362 aa9.01□□□□□ -0.97
SPTLC1P4-201ENST00000435997 RASSF4Q9H2L5 321 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms