RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 ZNF48Q96MX3 618 aaPredicted RBP13.14□□□□□ -0.31
NUP50-210ENST00000434760 JMJD8Q96S16 334 aa13.14□□□□□ -0.31
NUP50-210ENST00000434760 OPA3Q9H6K4 179 aa13.14□□□□□ -0.31
NUP50-210ENST00000434760 UFSP2Q9NUQ7 469 aa13.14□□□□□ -0.31
NUP50-210ENST00000434760 CTSZQ9UBR2 303 aa13.14□□□□□ -0.31
NUP50-210ENST00000434760 MIOXQ9UGB7 285 aa13.14□□□□□ -0.31
NUP50-210ENST00000434760 NUP50Q9UKX7 468 aa13.14□□□□□ -0.31
NUP50-210ENST00000434760 NOP16Q9Y3C1 178 aaKnown RBP13.14□□□□□ -0.31
NUP50-210ENST00000434760 PPIAL4AQ9Y536 164 aa13.14□□□□□ -0.31
NUP50-210ENST00000434760 hCG_38984A0A1B0GV85 526 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 C22orf46C9J442 243 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 TRIM77I1YAP6 450 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 ZNF593O00488 134 aaPredicted RBP13.13□□□□□ -0.31
NUP50-210ENST00000434760 PHYHO14832 338 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 IGHV4-38-2P0DP08 117 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 CFPP27918 469 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 PITPNBP48739 271 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 CX3CR1P49238 355 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 BLVRAP53004 296 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 GNB2P62879 340 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 SPATC1Q76KD6 591 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 DPY19L4Q7Z388 723 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 WDR86Q86TI4 376 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 SIGLECL1Q8N7X8 197 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 OR8B3Q8NGG8 313 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 OR6N2Q8NGY6 317 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 UPRTQ96BW1 309 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 LRGUKQ96M69 825 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 OR8B2Q96RD0 313 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 INTS14Q96SY0 518 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 THTPAQ9BU02 230 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 MRI1Q9BV20 369 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 SLC22A4Q9H015 551 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 FAM53CQ9NYF3 392 aa13.13□□□□□ -0.31
NUP50-210ENST00000434760 GGT3PA6NGU5 568 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 DNAJC9-AS1A6NH13 148 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 XRCC2O43543 280 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 GMDSO60547 372 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 FCN3O75636 299 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 GLCEO94923 617 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 PLATP00750 562 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 OPRL1P41146 370 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 GRB2P62993 217 aaKnown RBP13.12□□□□□ -0.31
NUP50-210ENST00000434760 EIF2B1Q14232 305 aaKnown RBP13.12□□□□□ -0.31
NUP50-210ENST00000434760 KLHL12Q53G59 568 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 WDR25Q64LD2 544 aaPredicted RBP13.12□□□□□ -0.31
NUP50-210ENST00000434760 C12orf54Q6X4T0 127 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 C9orf139Q6ZV77 190 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 NLRC3Q7RTR2 1065 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 SLC16A9Q7RTY1 509 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 ERI1Q8IV48 349 aaKnown RBP13.12□□□□□ -0.31
NUP50-210ENST00000434760 BCL6BQ8N143 479 aaPredicted RBP13.12□□□□□ -0.31
NUP50-210ENST00000434760 PARP8Q8N3A8 854 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 PLPP7Q8NBV4 271 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 OR11L1Q8NGX0 322 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 RAB40AQ8WXH6 277 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 ABHD6Q9BV23 337 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 CENPMQ9NSP4 180 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 ZNF319Q9P2F9 582 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 MGAM2Q2M2H8 2515 aa13.12□□□□□ -0.31
NUP50-210ENST00000434760 TRAV40A0A0B4J280 105 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 TCRBV3S1A0A5B6 114 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 H3BN98 237 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 DYNC1I1O14576 645 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 TNFRSF13BO14836 293 aaPredicted RBP13.11□□□□□ -0.31
NUP50-210ENST00000434760 IRF2P14316 349 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 GSTT1P30711 240 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 FAM3AP98173 230 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 TRPM8Q7Z2W7 1104 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 GCSAMQ8N6F7 178 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 SLC7A6OSQ96CW6 309 aaPredicted RBP13.11□□□□□ -0.31
NUP50-210ENST00000434760 PLEKHA8Q96JA3 519 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 TOR3AQ9H497 397 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 FN3KRPQ9HA64 309 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 NTN4Q9HB63 628 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 SMURF1Q9HCE7 757 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 PDP1Q9P0J1 537 aaPredicted RBP13.11□□□□□ -0.31
NUP50-210ENST00000434760 RNF7Q9UBF6 113 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 KLHDC2Q9Y2U9 406 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 CMYA5Q8N3K9 4069 aa13.11□□□□□ -0.31
NUP50-210ENST00000434760 LGALS8O00214 317 aa13.1□□□□□ -0.31
NUP50-210ENST00000434760 SELENOFO60613 162 aa13.1□□□□□ -0.31
NUP50-210ENST00000434760 EGR1P18146 543 aa13.1□□□□□ -0.31
NUP50-210ENST00000434760 SLC2A5P22732 501 aa13.1□□□□□ -0.31
NUP50-210ENST00000434760 FPR2P25090 351 aa13.1□□□□□ -0.31
NUP50-210ENST00000434760 ZNF121P58317 390 aaPredicted RBP13.1□□□□□ -0.31
NUP50-210ENST00000434760 DNAL1Q4LDG9 190 aa13.1□□□□□ -0.31
NUP50-210ENST00000434760 LRRN1Q6UXK5 716 aa13.1□□□□□ -0.31
NUP50-210ENST00000434760 ZNF826PQ6ZT77 177 aa13.1□□□□□ -0.31
NUP50-210ENST00000434760 RHOUQ7L0Q8 258 aa13.1□□□□□ -0.31
NUP50-210ENST00000434760 ZMYND19Q96E35 227 aaPredicted RBP13.1□□□□□ -0.31
NUP50-210ENST00000434760 PPP1R3EQ9H7J1 279 aa13.1□□□□□ -0.31
NUP50-210ENST00000434760 CLN8Q9UBY8 286 aa13.1□□□□□ -0.31
NUP50-210ENST00000434760 SOX21Q9Y651 276 aaPredicted RBP13.1□□□□□ -0.31
NUP50-210ENST00000434760 IGHV3OR16-10A0A075B7F0 116 aa13.09□□□□□ -0.31
NUP50-210ENST00000434760 KIR2DS1A0A191URI9 304 aa13.09□□□□□ -0.31
NUP50-210ENST00000434760 C3orf80F5H4A9 247 aa13.09□□□□□ -0.31
NUP50-210ENST00000434760 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.09□□□□□ -0.31
NUP50-210ENST00000434760 PRODHO43272 600 aa13.09□□□□□ -0.31
NUP50-210ENST00000434760 FKBP6O75344 327 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms