RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 SNX33Q8WV41 574 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 HPS1Q92902 700 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 ZNF799Q96GE5 643 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 MNTQ99583 582 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 KCNJ15Q99712 375 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 LPAR2Q9HBW0 351 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 TBCCD1Q9NVR7 557 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 EXOGQ9Y2C4 368 aaKnown RBP14.37□□□□□ -0.11
UBE3D-204ENST00000430071 STARD10Q9Y365 291 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 TMEM14AQ9Y6G1 99 aa14.37□□□□□ -0.11
UBE3D-204ENST00000430071 A0A1W2PQL4 384 aaPredicted RBP14.36□□□□□ -0.11
UBE3D-204ENST00000430071 C5orf63A6NC05 138 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 ZNF670-ZNF695F2Z2N8 137 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 MAGEB4O15481 346 aaPredicted RBP14.36□□□□□ -0.11
UBE3D-204ENST00000430071 IFNA2P01563 188 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 H2BFMP0C1H6 154 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 OR2T7P0C7T2 308 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 SRD5A1P18405 259 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 HSPA13P48723 471 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 ZNF81P51508 661 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 TPTEP56180 551 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 ROM1Q03395 351 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 MVKQ03426 396 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 SNCBQ16143 134 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 ARL9Q6T311 187 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 ZNF322Q6U7Q0 402 aaPredicted RBP14.36□□□□□ -0.11
UBE3D-204ENST00000430071 OR10H4Q8NGA5 316 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 OR2T27Q8NH04 317 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 ASB17Q8WXJ9 295 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 SPTSSAQ969W0 71 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 OR8B4Q96RC9 309 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 C1QTNF5Q9BXJ0 243 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 ANKRD60Q9BZ19 345 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 ELOVL3Q9HB03 270 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 MSL2Q9HCI7 577 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 MRPS18AQ9NVS2 196 aaKnown RBP14.36□□□□□ -0.11
UBE3D-204ENST00000430071 DCAF16Q9NXF7 216 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 NKIRAS2Q9NYR9 191 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 LPAR3Q9UBY5 353 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 LRP12Q9Y561 859 aa14.36□□□□□ -0.11
UBE3D-204ENST00000430071 MYF6P23409 242 aa14.35□□□□□ -0.11
UBE3D-204ENST00000430071 GCH1P30793 250 aa14.35□□□□□ -0.11
UBE3D-204ENST00000430071 SLC15A1P46059 708 aa14.35□□□□□ -0.11
UBE3D-204ENST00000430071 RGS6P49758 472 aa14.35□□□□□ -0.11
UBE3D-204ENST00000430071 TMEM33P57088 247 aa14.35□□□□□ -0.11
UBE3D-204ENST00000430071 GRB2P62993 217 aaKnown RBP14.35□□□□□ -0.11
UBE3D-204ENST00000430071 PSG7Q13046 419 aa14.35□□□□□ -0.11
UBE3D-204ENST00000430071 MBNL2Q5VZF2 373 aaKnown RBP14.35□□□□□ -0.11
UBE3D-204ENST00000430071 KCTD18Q6PI47 426 aaPredicted RBP14.35□□□□□ -0.11
UBE3D-204ENST00000430071 DRAM2Q6UX65 266 aa14.35□□□□□ -0.11
UBE3D-204ENST00000430071 KRT77Q7Z794 578 aa14.35□□□□□ -0.11
UBE3D-204ENST00000430071 MYRFQ9Y2G1 1151 aa14.35□□□□□ -0.11
UBE3D-204ENST00000430071 RPL36Q9Y3U8 105 aaKnown RBP14.35□□□□□ -0.11
UBE3D-204ENST00000430071 IGHV1-69-2A0A0G2JMI3 117 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 LCATP04180 440 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 SLC2A1P11166 492 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 HSD11B1P28845 292 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 CRYBB2P43320 205 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 CX3CR1P49238 355 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 MRPS11P82912 194 aaKnown RBP14.34□□□□□ -0.11
UBE3D-204ENST00000430071 ZNF85Q03923 595 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 SNAI3Q3KNW1 292 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 KRTAP24-1Q3LI83 254 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 ZNF684Q5T5D7 378 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 Q6ZR03 302 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 PRSS45Q7RTY3 260 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 ZNF679Q8IYX0 411 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 ZNF283Q8N7M2 679 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 OR52I1Q8NGK6 324 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 APOBEC3DQ96AK3 386 aaPredicted RBP14.34□□□□□ -0.11
UBE3D-204ENST00000430071 ZNF184Q99676 751 aaPredicted RBP14.34□□□□□ -0.11
UBE3D-204ENST00000430071 MRM2Q9UI43 246 aaKnown RBP14.34□□□□□ -0.11
UBE3D-204ENST00000430071 GPR160Q9UJ42 338 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 RAB26Q9ULW5 256 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 PHYHO14832 338 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 TPD52L2O43399 206 aaKnown RBP14.34□□□□□ -0.11
UBE3D-204ENST00000430071 XPNPEP2O43895 674 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 IGHA1P01876 353 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 SLC6A9P48067 706 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 RAB40BQ12829 278 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 DEGS2Q6QHC5 323 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 UNQ6126/PRO20091Q6UXV3 157 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.34□□□□□ -0.11
UBE3D-204ENST00000430071 ACBD7Q8N6N7 88 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 DECR2Q9NUI1 292 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 IKZF2Q9UKS7 526 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 WIPI2Q9Y4P8 454 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 PCDHGB5Q9Y5G0 923 aa14.34□□□□□ -0.11
UBE3D-204ENST00000430071 J3QW42 95 aa14.33□□□□□ -0.12
UBE3D-204ENST00000430071 FADS2O95864 444 aaKnown RBP14.33□□□□□ -0.12
UBE3D-204ENST00000430071 ZNF121P58317 390 aaPredicted RBP14.33□□□□□ -0.12
UBE3D-204ENST00000430071 ACTC1P68032 377 aa14.33□□□□□ -0.12
UBE3D-204ENST00000430071 ACTA1P68133 377 aa14.33□□□□□ -0.12
UBE3D-204ENST00000430071 EGR3Q06889 387 aa14.33□□□□□ -0.12
UBE3D-204ENST00000430071 PCGF3Q3KNV8 242 aa14.33□□□□□ -0.12
UBE3D-204ENST00000430071 KLHL22Q53GT1 634 aa14.33□□□□□ -0.12
UBE3D-204ENST00000430071 C6orf141Q5SZD1 244 aa14.33□□□□□ -0.12
UBE3D-204ENST00000430071 PLEKHG7Q6ZR37 379 aa14.33□□□□□ -0.12
UBE3D-204ENST00000430071 SPATA3Q8NHX4 192 aa14.33□□□□□ -0.12
UBE3D-204ENST00000430071 CMBLQ96DG6 245 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms