RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 CEP250Q9BV73 2442 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 MTRF1O75570 445 aaKnown RBP12.29□□□□□ -0.44
SGMS1-203ENST00000429490 MT-ATP6P00846 226 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 ITGB2P05107 769 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 ASAH2BP0C7U1 165 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 OR1D5P58170 312 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 VAMP2P63027 116 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 TFAP2EQ6VUC0 442 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 CPEB2Q7Z5Q1 589 aaKnown RBP12.29□□□□□ -0.44
SGMS1-203ENST00000429490 NAA40Q86UY6 237 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 STX12Q86Y82 276 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 ZNF565Q8N9K5 539 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 OR2I1PQ8NGU4 316 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 FAM213BQ8TBF2 198 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 SPACA1Q9HBV2 294 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 KLHL13Q9P2N7 655 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 LOC101059948A0A1B0GTJ6 334 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 A0A1W2PPC1 479 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 A0A1W2PQF6 199 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 DNASE2O00115 360 aaPredicted RBP12.28□□□□□ -0.44
SGMS1-203ENST00000429490 SFTA3P0C7M3 94 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 ABCD3P28288 659 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 ID4P47928 161 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 HERV-K104P61576 105 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 OR13C8Q8NGS7 320 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 ZNF275Q9NSD4 429 aaPredicted RBP12.28□□□□□ -0.44
SGMS1-203ENST00000429490 UQCC1Q9NVA1 299 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 SLC5A6Q9Y289 635 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 KCNK7Q9Y2U2 307 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 RCC1P18754 421 aaPredicted RBP12.28□□□□□ -0.44
SGMS1-203ENST00000429490 FCGR2CP31995 323 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 RSU1Q15404 277 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 TMEM128Q5BJH2 165 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 S100PBPQ96BU1 408 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 RSRP1Q9BUV0 290 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 OR10A2Q9H208 303 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 FN3KRPQ9HA64 309 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 MRPL22Q9NWU5 206 aaKnown RBP12.28□□□□□ -0.44
SGMS1-203ENST00000429490 RER1O15258 196 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 OR3A4PP47883 348 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 CSNK1EP49674 416 aaKnown RBP12.28□□□□□ -0.44
SGMS1-203ENST00000429490 OGFOD3Q6PK18 319 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 BRICD5Q6PL45 260 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 Q6ZS52 159 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 OR5AP2Q8NGF4 316 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 OR56B1Q8NGI3 324 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 ADAT3Q96EY9 351 aaPredicted RBP12.28□□□□□ -0.44
SGMS1-203ENST00000429490 SMCO4Q9NRQ5 59 aa12.28□□□□□ -0.44
SGMS1-203ENST00000429490 NXT1Q9UKK6 140 aaKnown RBP12.28□□□□□ -0.44
SGMS1-203ENST00000429490 RNASEK-C17orf49H0YIS7 233 aa12.27□□□□□ -0.44
SGMS1-203ENST00000429490 PDCD1Q15116 288 aa12.27□□□□□ -0.44
SGMS1-203ENST00000429490 C14orf28Q4W4Y0 310 aa12.27□□□□□ -0.44
SGMS1-203ENST00000429490 PDZD11Q5EBL8 140 aa12.27□□□□□ -0.44
SGMS1-203ENST00000429490 LY6G6FQ5SQ64 297 aa12.27□□□□□ -0.44
SGMS1-203ENST00000429490 RAET1LQ5VY80 246 aa12.27□□□□□ -0.44
SGMS1-203ENST00000429490 SECTM1Q8WVN6 248 aa12.27□□□□□ -0.44
SGMS1-203ENST00000429490 MCHR2Q969V1 340 aa12.27□□□□□ -0.44
SGMS1-203ENST00000429490 ZCCHC4Q9H5U6 513 aa12.27□□□□□ -0.44
SGMS1-203ENST00000429490 ZNF442Q9H7R0 627 aa12.27□□□□□ -0.44
SGMS1-203ENST00000429490 WIF1Q9Y5W5 379 aa12.27□□□□□ -0.44
SGMS1-203ENST00000429490 TRBV5-7A0A0A0MS05 114 aa12.27□□□□□ -0.45
SGMS1-203ENST00000429490 SULT2B1O00204 365 aa12.27□□□□□ -0.45
SGMS1-203ENST00000429490 VSIG8P0DPA2 414 aa12.27□□□□□ -0.45
SGMS1-203ENST00000429490 ZNF44P15621 663 aa12.27□□□□□ -0.45
SGMS1-203ENST00000429490 S100A2P29034 98 aa12.27□□□□□ -0.45
SGMS1-203ENST00000429490 GABREP78334 506 aa12.27□□□□□ -0.45
SGMS1-203ENST00000429490 PJVKQ0ZLH3 352 aa12.27□□□□□ -0.45
SGMS1-203ENST00000429490 C9orf50Q5SZB4 431 aa12.27□□□□□ -0.45
SGMS1-203ENST00000429490 TMEM104Q8NE00 496 aa12.27□□□□□ -0.45
SGMS1-203ENST00000429490 PCDHGA1Q9Y5H4 931 aa12.27□□□□□ -0.45
SGMS1-203ENST00000429490 TRBV11-1A0A0K0K1C0 115 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 ABHD16AO95870 558 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 IGHG1P01857 330 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 RPL12P30050 165 aaKnown RBP12.26□□□□□ -0.45
SGMS1-203ENST00000429490 GNRHRP30968 328 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 GPR85P60893 370 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 TAF9Q16594 264 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 C8orf44Q96CB5 159 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 ZNF2Q9BSG1 426 aaPredicted RBP12.26□□□□□ -0.45
SGMS1-203ENST00000429490 IFT22Q9H7X7 185 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 FGF21Q9NSA1 209 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 CTSFQ9UBX1 484 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 TMEM184BQ9Y519 407 aaPredicted RBP12.26□□□□□ -0.45
SGMS1-203ENST00000429490 SCGNO76038 276 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 DUS4LO95620 317 aaKnown RBP12.26□□□□□ -0.45
SGMS1-203ENST00000429490 NQO2P16083 231 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 GABRG2P18507 467 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 BCKDHBP21953 392 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 SLC37A1P57057 533 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 ZNF121P58317 390 aaPredicted RBP12.26□□□□□ -0.45
SGMS1-203ENST00000429490 SRSF3P84103 164 aaKnown RBP12.26□□□□□ -0.45
SGMS1-203ENST00000429490 GNMTQ14749 295 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.26□□□□□ -0.45
SGMS1-203ENST00000429490 SLC25A42Q86VD7 318 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 SLC26A10Q8NG04 563 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 OR5L1Q8NGL2 311 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 USB1Q9BQ65 265 aaKnown RBP12.26□□□□□ -0.45
SGMS1-203ENST00000429490 DEFB126Q9BYW3 111 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 OBP2AQ9NY56 170 aa12.26□□□□□ -0.45
SGMS1-203ENST00000429490 OR5AC2Q9NZP5 309 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms