RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SIRPDQ9H106 197 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 SEMA6AQ9H2E6 1030 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 FN3KRPQ9HA64 309 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 ACOXLQ9NUZ1 547 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 C1orf123Q9NWV4 160 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 DNAJB11Q9UBS4 358 aa13.68□□□□□ -0.22
VARS-216ENST00000428445 IGHV1-69DA0A0B4J2H0 117 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 TVP23AA6NH52 213 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 OR10H3O60404 316 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 GPR137BO60478 399 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 TSPAN15O95858 294 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 IGHV1-69P01742 117 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 PRDX6P30041 224 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 SLC6A6P31641 620 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 IFNGR2P38484 337 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 NPY4RP50391 375 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 PSME3P61289 254 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 GLYATL3Q5SZD4 288 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 CD276Q5ZPR3 534 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 HIST2H2BDQ6DRA6 164 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 BTN2A1Q7KYR7 527 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 RNF148Q8N7C7 305 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 SPAG4Q9NPE6 437 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 KCNG2Q9UJ96 466 aa13.67□□□□□ -0.22
VARS-216ENST00000428445 OOEPA6NGQ2 149 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 GGT3PA6NGU5 568 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 M0R135 149 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 DVL1O14640 695 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 LIPFP07098 398 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 SLC2A1P11166 492 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 NUDT2P50583 147 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 TPTEP56180 551 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 KCNJ8Q15842 424 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 OCLNQ16625 522 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 C11orf91Q3C1V1 193 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 HSP90B2PQ58FF3 399 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 METTL11BQ5VVY1 283 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 FAM90A1Q86YD7 464 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 TMEM86BQ8N661 226 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 GCSAMQ8N6F7 178 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 CYB561A3Q8NBI2 242 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 SCCPDHQ8NBX0 429 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 OR51L1Q8NGJ5 315 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 SSMEM1Q8WWF3 244 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 SEH1LQ96EE3 360 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 ZNF799Q96GE5 643 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 PYURFQ96I23 114 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 MMP27Q9H306 513 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 PPP1R3EQ9H7J1 279 aa13.66□□□□□ -0.22
VARS-216ENST00000428445 A0A0G2JK05 382 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 A0A1W2PRD5 423 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 A0A1W2PRF3 423 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 A0A1W2PRM7 423 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 A6NLC8 198 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 M0QZ24 198 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 NDUFA2O43678 99 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 GMDSO60547 372 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 GADD45GO95257 159 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 NOS3P29474 1203 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 IER3P46695 156 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 PRKXP51817 358 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 PROK1P58294 105 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 SPIBQ01892 262 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 PNLDC1Q8NA58 520 aaKnown RBP13.65□□□□□ -0.22
VARS-216ENST00000428445 FAM110DQ8TAY7 271 aaPredicted RBP13.65□□□□□ -0.22
VARS-216ENST00000428445 TBC1D15Q8TC07 691 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 ST8SIA4Q92187 359 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 DYRK2Q92630 601 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 TRIM15Q9C019 465 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 TRIM36Q9NQ86 728 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 POMT1Q9Y6A1 747 aa13.65□□□□□ -0.22
VARS-216ENST00000428445 TRAV38-1A0A0B4J264 116 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 hCG_1807616A0A1W2PRN6 198 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 PTBP3O95758 552 aaKnown RBP13.64□□□□□ -0.23
VARS-216ENST00000428445 MSX2P35548 267 aaPredicted RBP13.64□□□□□ -0.23
VARS-216ENST00000428445 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.64□□□□□ -0.23
VARS-216ENST00000428445 TAF9Q16594 264 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 Q6ZSV7 163 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 VMO1Q7Z5L0 202 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 WDR86Q86TI4 376 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 C11orf53Q8IXP5 236 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 SPERTQ8NA61 448 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 OR56B2PQ8NGI1 322 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 UBE2FQ969M7 185 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 CCL13Q99616 98 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 EGLN3Q9H6Z9 239 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 KIF17Q9P2E2 1029 aa13.64□□□□□ -0.23
VARS-216ENST00000428445 TIMM23O14925 209 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 CLPXO76031 633 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 LHBP01229 141 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 TFF1P04155 84 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 ZNF823P16415 610 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 MZT1Q08AG7 82 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 PDCD1Q15116 288 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 RPL13AP3Q6NVV1 102 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 PNKDQ8N490 385 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 LINC00471Q8N535 108 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 GNPDA2Q8TDQ7 276 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 SPTSSAQ969W0 71 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms