RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TRIM77I1YAP6 450 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 GYG2O15488 501 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 E2F6O75461 281 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 ANXA2P07355 339 aaKnown RBP15.38■□□□□ 0.05
PSPC1-202ENST00000427943 HSD11B1P28845 292 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 GSTT1P30711 240 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 CD80P33681 288 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 BLVRAP53004 296 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 GRB2P62993 217 aaKnown RBP15.38■□□□□ 0.05
PSPC1-202ENST00000427943 FLOT2Q14254 428 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 BOLLQ8N9W6 283 aaKnown RBP15.38■□□□□ 0.05
PSPC1-202ENST00000427943 OR8B3Q8NGG8 313 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 BCAS4Q8TDM0 211 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 OR8B2Q96RD0 313 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 JMJD8Q96S16 334 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 AMELYQ99218 206 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 ABHD6Q9BV23 337 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 SLC22A4Q9H015 551 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 OR51V1Q9H2C8 321 aa15.38■□□□□ 0.05
PSPC1-202ENST00000427943 NOP16Q9Y3C1 178 aaKnown RBP15.38■□□□□ 0.05
PSPC1-202ENST00000427943 XRCC2O43543 280 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 GMDSO60547 372 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 GLCEO94923 617 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 PAICSP22234 425 aaKnown RBP15.37■□□□□ 0.05
PSPC1-202ENST00000427943 PRKACGP22612 351 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 FPR2P25090 351 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 PITPNBP48739 271 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 PAX2Q02962 417 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 GINS1Q14691 196 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 DNAL1Q4LDG9 190 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 PLBD1Q6P4A8 553 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 NLRC3Q7RTR2 1065 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 ERGIC1Q969X5 290 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 ZMYND19Q96E35 227 aaPredicted RBP15.37■□□□□ 0.05
PSPC1-202ENST00000427943 PLEKHA8Q96JA3 519 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 FN3KRPQ9HA64 309 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 BRD7Q9NPI1 651 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 ZNF69Q9UC07 566 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 NUP50Q9UKX7 468 aa15.37■□□□□ 0.05
PSPC1-202ENST00000427943 IGHV3OR16-10A0A075B7F0 116 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 IGHV2-70DA0A0C4DH43 119 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 PRR23D1E9PI22 279 aaPredicted RBP15.36■□□□□ 0.05
PSPC1-202ENST00000427943 FSTL3O95633 263 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 GRPP07492 148 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 PRR23D2P0DMB1 279 aaPredicted RBP15.36■□□□□ 0.05
PSPC1-202ENST00000427943 SLC15A1P46059 708 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 CBX1P83916 185 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 TIGD6Q17RP2 521 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 GFOD2Q3B7J2 385 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 SFRP4Q6FHJ7 346 aaPredicted RBP15.36■□□□□ 0.05
PSPC1-202ENST00000427943 BTNL3Q6UXE8 466 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 DCDC5Q6ZRR9 648 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 FAM57BQ71RH2 274 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 SLC16A9Q7RTY1 509 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 TIGD4Q8IY51 512 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 BCL6BQ8N143 479 aaPredicted RBP15.36■□□□□ 0.05
PSPC1-202ENST00000427943 SIGLECL1Q8N7X8 197 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 ZDHHC22Q8N966 263 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 FAM216AQ8WUB2 273 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 RNF133Q8WVZ7 376 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 SPSB4Q96A44 273 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 SLC7A6OSQ96CW6 309 aaPredicted RBP15.36■□□□□ 0.05
PSPC1-202ENST00000427943 MMADHCQ9H3L0 296 aaPredicted RBP15.36■□□□□ 0.05
PSPC1-202ENST00000427943 TOR3AQ9H497 397 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 OPA3Q9H6K4 179 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 MARCH7Q9H992 704 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 C1orf123Q9NWV4 160 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 MRPL15Q9P015 296 aaKnown RBP15.36■□□□□ 0.05
PSPC1-202ENST00000427943 RNF7Q9UBF6 113 aa15.36■□□□□ 0.05
PSPC1-202ENST00000427943 A6NLC8 198 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 C3orf80F5H4A9 247 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 SELENOFO60613 162 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 FKBP6O75344 327 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 OSMP13725 252 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 ZNF121P58317 390 aaPredicted RBP15.35■□□□□ 0.05
PSPC1-202ENST00000427943 PAX8Q06710 450 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 KLHL12Q53G59 568 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 ZNF826PQ6ZT77 177 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 SHFQ7M4L6 423 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 REEP6Q96HR9 211 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 ZNF556Q9HAH1 456 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 CTSZQ9UBR2 303 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 CLN8Q9UBY8 286 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 POMPQ9Y244 141 aa15.35■□□□□ 0.05
PSPC1-202ENST00000427943 TRAV40A0A0B4J280 105 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.34■□□□□ 0.05
PSPC1-202ENST00000427943 PTBP3O95758 552 aaKnown RBP15.34■□□□□ 0.05
PSPC1-202ENST00000427943 H2BFMP0C1H6 154 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 IGHV4-38-2P0DP08 117 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 CPT2P23786 658 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 OPRL1P41146 370 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 NAA10P41227 235 aaPredicted RBP15.34■□□□□ 0.05
PSPC1-202ENST00000427943 UBA52P62987 128 aaKnown RBP15.34■□□□□ 0.05
PSPC1-202ENST00000427943 FAM3AP98173 230 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 OR8B8Q15620 311 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 TMEM236Q5W0B7 351 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 WDR25Q64LD2 544 aaPredicted RBP15.34■□□□□ 0.05
PSPC1-202ENST00000427943 LRRN1Q6UXK5 716 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 PARP8Q8N3A8 854 aa15.34■□□□□ 0.05
PSPC1-202ENST00000427943 BBS1Q8NFJ9 593 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms