RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ELP2Q6IA86 826 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 RBM45Q8IUH3 476 aaKnown RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 NPWQ8N729 165 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 OR4D9Q8NGE8 314 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 BAHD1Q8TBE0 780 aaPredicted RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 ZNF799Q96GE5 643 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 TNFRSF13CQ96RJ3 184 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SLC22A12Q96S37 553 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 PRDM14Q9GZV8 571 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 YAE1D1Q9NRH1 226 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 CES1P1Q9UKY3 287 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SMLR1H3BR10 107 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 OR5H8P0DN80 308 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MYF5P13349 255 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 AKR1C3P42330 323 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ETV4P43268 484 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 TSPAN31Q12999 210 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ZNF789Q5FWF6 425 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 CT83Q5H943 113 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SLC25A30Q5SVS4 291 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SLC48A1Q6P1K1 146 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 DRAM2Q6UX65 266 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 PRSS48Q7RTY5 328 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ADGRE4PQ86SQ3 457 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 PRSS35Q8N3Z0 413 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ZNF740Q8NDX6 193 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 OR10P1Q8NGE3 313 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 BCL2L2Q92843 193 aaPredicted RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 KHSRPQ92945 711 aaKnown RBP eCLIP5.19□□□□□ -1.588e-7■■■■□ 19.5
HERC4-206ENST00000427635 ACY3Q96HD9 319 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MUS81Q96NY9 551 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 DDOQ99489 341 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MS4A8Q9BY19 250 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 OR2B2Q9GZK3 357 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 CXXC4Q9H2H0 198 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 GAR1Q9NY12 217 aaKnown RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 CTSFQ9UBX1 484 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ETV7Q9Y603 341 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MON2Q7Z3U7 1717 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 LOC100289279A0A1B0GTE1 492 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ANKUB1A6NFN9 424 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 C21orf140B9A014 251 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ARPC5O15511 151 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ICOSLGO75144 302 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ACHEP22303 614 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 BAMBIQ13145 260 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SYPL1Q16563 259 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 EMC4Q5J8M3 183 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MARCH8Q5T0T0 291 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 COMMD7Q86VX2 200 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 DTWD1Q8N5C7 304 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ADPRHL1Q8NDY3 354 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MRGPRX3Q96LB0 322 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ACTR3CQ9C0K3 210 aaPredicted RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 BABAM2Q9NXR7 383 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ERRFI1Q9UJM3 462 aaPredicted RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 SPEF2Q9C093 1822 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MICAL3Q7RTP6 2002 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SPAARA0A1B0GVQ0 90 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 A0A1B0GWA3 101 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 A0A1W2PN81 502 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 A0A1W2PQL4 384 aaPredicted RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 FAM183AA6NL82 134 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 H0Y8X5 98 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SCGB1C2P0DMR2 95 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SLC25A6P12236 298 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 CHRNA7P36544 502 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 OPRK1P41145 380 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ASCL1P50553 236 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ELLP55199 621 aaPredicted RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 ELFN2Q5R3F8 820 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SPATA46Q5T0L3 261 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MDGA2Q7Z553 956 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 KLHDC8BQ8IXV7 354 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 OR4C3Q8NH37 302 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SLC25A40Q8TBP6 338 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SPSB4Q96A44 273 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SLC45A3Q96JT2 553 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 JMJD8Q96S16 334 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 RTN4RQ9BZR6 473 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 CHST6Q9GZX3 395 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 RAB6CQ9H0N0 254 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MS4A5Q9H3V2 200 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 EXOSC3Q9NQT5 275 aaKnown RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 FBXO34Q9NWN3 711 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 HRASP01112 189 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 CD14P08571 375 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 CD22P20273 847 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 GABRA5P31644 462 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MS4A2Q01362 244 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 TFF2Q03403 129 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 MGAT3Q09327 533 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 DOC2BQ14184 412 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 SHBQ15464 509 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 ZNF141Q15928 474 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 RSPO4Q2I0M5 234 aaPredicted RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 TCTN1Q2MV58 587 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 METRNLQ641Q3 311 aa5.19□□□□□ -1.58
HERC4-206ENST00000427635 FAM109BQ6ICB4 259 aaPredicted RBP5.19□□□□□ -1.58
HERC4-206ENST00000427635 OR13J1Q8NGT2 312 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms