RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 LRCH1Q9Y2L9 728 aa15.46■□□□□ 0.07
GPC1-205ENST00000427506 DNHD1Q96M86 4753 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 TRAPPC2LH3BP13 241 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 FAM20BO75063 409 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 WNT2P09544 360 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 H2BFMP0C1H6 154 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 GNB2P62879 340 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 MPPED2Q15777 294 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 TIGD6Q17RP2 521 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 FAM201AQ5SY85 155 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 KLBQ86Z14 1044 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.45■□□□□ 0.06
GPC1-205ENST00000427506 BPIFB2Q8N4F0 458 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 PAPD5Q8NDF8 572 aaKnown RBP15.45■□□□□ 0.06
GPC1-205ENST00000427506 OR56B2PQ8NGI1 322 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 THEM6Q8WUY1 208 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 DVL3Q92997 716 aaPredicted RBP15.45■□□□□ 0.06
GPC1-205ENST00000427506 TMEM246Q9BRR3 403 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 MRI1Q9BV20 369 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 SSBP3Q9BWW4 388 aaPredicted RBP15.45■□□□□ 0.06
GPC1-205ENST00000427506 CADM1Q9BY67 442 aaKnown RBP15.45■□□□□ 0.06
GPC1-205ENST00000427506 MARCH7Q9H992 704 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 MRPL15Q9P015 296 aaKnown RBP15.45■□□□□ 0.06
GPC1-205ENST00000427506 OPN4Q9UHM6 478 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 AUP1Q9Y679 476 aa15.45■□□□□ 0.06
GPC1-205ENST00000427506 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.44■□□□□ 0.06
GPC1-205ENST00000427506 A8MXK9 166 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 TIPRLO75663 272 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 CPT2P23786 658 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 RASSF2P50749 326 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 RPS7P62081 194 aaKnown RBP15.44■□□□□ 0.06
GPC1-205ENST00000427506 CDK5Q00535 292 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 ZNF154Q13106 437 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 GFOD2Q3B7J2 385 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 ZNF404Q494X3 552 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 ARMCX4Q5H9R4 360 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 TMEM236Q5W0B7 351 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 FAM57BQ71RH2 274 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 NLRC3Q7RTR2 1065 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 CPOQ8IVL8 374 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 TIGD4Q8IY51 512 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 BOLLQ8N9W6 283 aaKnown RBP15.44■□□□□ 0.06
GPC1-205ENST00000427506 SPERTQ8NA61 448 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 DEFB108BQ8NET1 73 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 OR8B3Q8NGG8 313 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 Q8TCH9 128 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 RNF133Q8WVZ7 376 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 NEIL1Q96FI4 390 aaPredicted RBP15.44■□□□□ 0.06
GPC1-205ENST00000427506 REEP6Q96HR9 211 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 OR8B2Q96RD0 313 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 BRD7Q9NPI1 651 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 POLR3KQ9Y2Y1 108 aaPredicted RBP15.44■□□□□ 0.06
GPC1-205ENST00000427506 INSIG2Q9Y5U4 225 aa15.44■□□□□ 0.06
GPC1-205ENST00000427506 ANKRD30BLA7E2S9 258 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 PRODHO43272 600 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 SELENOFO60613 162 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 GRPP07492 148 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 LYNP07948 512 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 ZNF12P17014 697 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 FPR2P25090 351 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 DDOSTP39656 456 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 ZNF121P58317 390 aaPredicted RBP15.43■□□□□ 0.06
GPC1-205ENST00000427506 MZT1Q08AG7 82 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 BNIP1Q12981 228 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 SLC16A9Q7RTY1 509 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 C19orf18Q8NEA5 215 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 OR52H1Q8NGJ2 320 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 C22orf15Q8WYQ4 148 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 PGAM5Q96HS1 289 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 JMJD8Q96S16 334 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 AMELYQ99218 206 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 SLC6A7Q99884 636 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 SUCNR1Q9BXA5 334 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 OR10A2Q9H208 303 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 PAPOLBQ9NRJ5 636 aaKnown RBP15.43■□□□□ 0.06
GPC1-205ENST00000427506 RNF7Q9UBF6 113 aa15.43■□□□□ 0.06
GPC1-205ENST00000427506 A6NLC8 198 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 FSTL3O95633 263 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 CFL1P23528 166 aaKnown RBP15.42■□□□□ 0.06
GPC1-205ENST00000427506 OPRL1P41146 370 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 NAA10P41227 235 aaPredicted RBP15.42■□□□□ 0.06
GPC1-205ENST00000427506 SNAPC1Q16533 368 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 SLC35D3Q5M8T2 416 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 BTNL3Q6UXE8 466 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 RHOUQ7L0Q8 258 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.42■□□□□ 0.06
GPC1-205ENST00000427506 ZNF454Q8N9F8 522 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 PLPP7Q8NBV4 271 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 SEMA6DQ8NFY4 1073 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 OR8S1Q8NH09 359 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 OTOSQ8NHW6 89 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 DNAJC9Q8WXX5 260 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 SPSB4Q96A44 273 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 SGK3Q96BR1 496 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 NRBF2Q96F24 287 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 NTN4Q9HB63 628 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 SLC25A19Q9HC21 320 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 C14orf119Q9NWQ9 140 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 C1orf123Q9NWV4 160 aa15.42■□□□□ 0.06
GPC1-205ENST00000427506 TVP23BQ9NYZ1 205 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms