RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SFTA3P0C7M3 94 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 NHLH1Q02575 133 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 NHLH2Q02577 135 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 XKR7Q5GH72 579 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 FIZ1Q96SL8 496 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 ATG101Q9BSB4 218 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 ZNF835Q9Y2P0 537 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 ASXL3Q9C0F0 2248 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 RGS13O14921 159 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 ZNF865P0CJ78 1059 aaPredicted RBP13.12□□□□□ -0.31
PTPN13-203ENST00000427191 ISL1P61371 349 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 MANBALQ9NQG1 85 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 A6NDN8 102 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 CRISP2P16562 243 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 EMP3P54852 163 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 EXOSC2Q13868 293 aaKnown RBP13.12□□□□□ -0.31
PTPN13-203ENST00000427191 ZNF511Q8NB15 262 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 OR1L1Q8NH94 360 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 PFN4Q8NHR9 129 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 SARAFQ96BY9 339 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 SEBOXQ9HB31 216 aaPredicted RBP13.12□□□□□ -0.31
PTPN13-203ENST00000427191 PROCRQ9UNN8 238 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 EFSO43281 561 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 GALR1P47211 349 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 HTRA3P83110 453 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 ELOBQ15370 118 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 PDXPQ96GD0 296 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 TMEM265A0A087WTH1 108 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 CST4P01036 141 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 CRYAAP02489 173 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 VWA1Q6PCB0 445 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 TOMM20LQ6UXN7 152 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 MRPL43Q8N983 215 aaKnown RBP13.12□□□□□ -0.31
PTPN13-203ENST00000427191 CGGBP1Q9UFW8 167 aaPredicted RBP13.12□□□□□ -0.31
PTPN13-203ENST00000427191 METRNLQ641Q3 311 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 OR10C1Q96KK4 312 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 THYN1Q9P016 225 aa13.12□□□□□ -0.31
PTPN13-203ENST00000427191 OPN1LWP04000 364 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 COX20Q5RI15 118 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 OR2W3Q7Z3T1 314 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 ARFGAP1Q8N6T3 406 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 BANF2Q9H503 90 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 CLEC2DQ9UHP7 191 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 PRSS37A4D1T9 235 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 POU2F2P09086 479 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 CLLU1Q5K131 121 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 C11orf42Q8N5U0 333 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 RXFP4Q8TDU9 374 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 CTRCQ99895 268 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 ESRP2Q9H6T0 727 aaKnown RBP13.11□□□□□ -0.31
PTPN13-203ENST00000427191 RHOFQ9HBH0 211 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 SHBQ15464 509 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 ZNF528Q3MIS6 628 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 LRRC10Q5BKY1 277 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 TEX261Q6UWH6 196 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 ZNF429Q86V71 674 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 SLC26A10Q8NG04 563 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 U3KQ87 197 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 A0A1W2PN81 502 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 CHRNA7P36544 502 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 PPP1R1CQ8WVI7 109 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 ANAPC16Q96DE5 110 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 TMEM147Q9BVK8 224 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 TRPM6Q9BX84 2022 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 SIAH2O43255 324 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 ARRB2P32121 409 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.11□□□□□ -0.31
PTPN13-203ENST00000427191 TAAR9Q96RI9 348 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 MACROD1Q9BQ69 325 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 GPR173Q9NS66 373 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 MYO5AQ9Y4I1 1855 aaKnown RBP13.11□□□□□ -0.31
PTPN13-203ENST00000427191 PHOX2AO14813 284 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 OR2J3O76001 311 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 SLC35B3Q9H1N7 401 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 IL2RAP01589 272 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 PFN3P60673 137 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 Q6ZPB1 254 aaPredicted RBP13.11□□□□□ -0.31
PTPN13-203ENST00000427191 MARCH3Q86UD3 253 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 ACER3Q9NUN7 267 aa13.11□□□□□ -0.31
PTPN13-203ENST00000427191 TMEM30CPA0ZSE6 113 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 TNFRSF1AP19438 455 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 FPR2P25090 351 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 AANATQ16613 207 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 OSR2Q8N2R0 312 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 SMIM12Q96EX1 92 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 GPR84Q9NQS5 396 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 OTOFQ9HC10 1997 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 M0R082 166 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 OPN1MWP04001 364 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 OPN1MW2P0DN77 364 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 OPN1MW3P0DN78 364 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 GOSR1O95249 250 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 MAT1AQ00266 395 aaKnown RBP13.1□□□□□ -0.31
PTPN13-203ENST00000427191 ERV3-1Q14264 604 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 ATP6V1FQ16864 119 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 CALHM3Q86XJ0 350 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 KMT5CQ86Y97 462 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 LILRA2Q8N149 483 aa13.1□□□□□ -0.31
PTPN13-203ENST00000427191 RTN4IP1Q8WWV3 396 aaPredicted RBP13.1□□□□□ -0.31
PTPN13-203ENST00000427191 Q96M85 177 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms