RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 C4orf36Q96KX1 117 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 CNBD2Q96M20 576 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 BARX1Q9HBU1 254 aaPredicted RBP20.86■□□□□ 0.93
VEGFA-209ENST00000425836 CNOT2Q9NZN8 540 aaKnown RBP20.86■□□□□ 0.93
VEGFA-209ENST00000425836 OR52A1Q9UKL2 312 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 DIMT1Q9UNQ2 313 aaKnown RBP20.86■□□□□ 0.93
VEGFA-209ENST00000425836 SNX5Q9Y5X3 404 aa20.86■□□□□ 0.93
VEGFA-209ENST00000425836 GGT3PA6NGU5 568 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 J3QLW9 94 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 SPRY3O43610 288 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 LY6HO94772 140 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 ERCC1P07992 297 aaPredicted RBP20.85■□□□□ 0.93
VEGFA-209ENST00000425836 LIMS3P0CW19 117 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 LIMS4P0CW20 117 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 ZNF19P17023 458 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 MVKQ03426 396 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 ST3GAL4Q11206 333 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 TESK1Q15569 626 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 NEU4Q8WWR8 484 aaPredicted RBP20.85■□□□□ 0.93
VEGFA-209ENST00000425836 TMEM80Q96HE8 168 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 MOB1AQ9H8S9 216 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 GTF2A1LQ9UNN4 478 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 ARFGEF3Q5TH69 2177 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 A0A0U1RQV5 110 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 hCG_38984A0A1B0GV85 526 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 IGHV1-46P01743 117 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 CFL1P23528 166 aaKnown RBP20.85■□□□□ 0.93
VEGFA-209ENST00000425836 PSMB10P40306 273 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 MAGEB1P43366 347 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 ETV1P50549 477 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 CSNK2BP67870 215 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 ZMAT1Q5H9K5 638 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 SYS1Q8N2H4 156 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 SPRYD4Q8WW59 207 aaPredicted RBP20.85■□□□□ 0.93
VEGFA-209ENST00000425836 MYCBPQ99417 103 aaPredicted RBP20.85■□□□□ 0.93
VEGFA-209ENST00000425836 SOX7Q9BT81 388 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 ISG20L2Q9H9L3 353 aaKnown RBP20.85■□□□□ 0.93
VEGFA-209ENST00000425836 FKBP14Q9NWM8 211 aa20.85■□□□□ 0.93
VEGFA-209ENST00000425836 SLC1A7O00341 560 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 SSX4O60224 188 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 TTRP02766 147 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 ADH4P08319 380 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 GSK3AP49840 483 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 Q5PR19 223 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 BCL2L15Q5TBC7 163 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 SHEQ5VZ18 495 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 PRSS57Q6UWY2 283 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 CATSPERDQ86XM0 798 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 EGFL6Q8IUX8 553 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 ELMOD2Q8IZ81 293 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 OR56B2PQ8NGI1 322 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 PELI1Q96FA3 418 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 SLC30A2Q9BRI3 323 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 NKIRAS2Q9NYR9 191 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 ZNF391Q9UJN7 358 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 ZDHHC8Q9ULC8 765 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 SLC22A13Q9Y226 551 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 EXOSC1Q9Y3B2 195 aaKnown RBP20.84■□□□□ 0.93
VEGFA-209ENST00000425836 PCDHGB5Q9Y5G0 923 aa20.84■□□□□ 0.93
VEGFA-209ENST00000425836 IGLV3-1P01715 115 aa20.83■□□□□ 0.92
VEGFA-209ENST00000425836 CCL8P80075 99 aa20.83■□□□□ 0.92
VEGFA-209ENST00000425836 TNK1Q13470 666 aa20.83■□□□□ 0.92
VEGFA-209ENST00000425836 PCGF3Q3KNV8 242 aa20.83■□□□□ 0.92
VEGFA-209ENST00000425836 AHSA2Q719I0 299 aa20.83■□□□□ 0.92
VEGFA-209ENST00000425836 ZNF540Q8NDQ6 660 aa20.83■□□□□ 0.92
VEGFA-209ENST00000425836 OR51E1Q8TCB6 317 aa20.83■□□□□ 0.92
VEGFA-209ENST00000425836 CLEC2DQ9UHP7 191 aa20.83■□□□□ 0.92
VEGFA-209ENST00000425836 NCR1O76036 304 aa20.82■□□□□ 0.92
VEGFA-209ENST00000425836 HPXP02790 462 aa20.82■□□□□ 0.92
VEGFA-209ENST00000425836 DDOSTP39656 456 aa20.82■□□□□ 0.92
VEGFA-209ENST00000425836 TSTQ16762 297 aaKnown RBP20.82■□□□□ 0.92
VEGFA-209ENST00000425836 OR13G1Q8NGZ3 307 aa20.82■□□□□ 0.92
VEGFA-209ENST00000425836 DIRC2Q96SL1 478 aa20.82■□□□□ 0.92
VEGFA-209ENST00000425836 TMEM100Q9NV29 134 aa20.82■□□□□ 0.92
VEGFA-209ENST00000425836 AKAP9Q99996 3911 aa20.82■□□□□ 0.92
VEGFA-209ENST00000425836 CCDC168Q8NDH2 2452 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 A0A1B0GWJ7 208 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 DENRO43583 198 aaKnown RBP20.81■□□□□ 0.92
VEGFA-209ENST00000425836 MYL12AP19105 171 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 OR8B8Q15620 311 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 WDR38Q5JTN6 314 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 FAM209AQ5JX71 171 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 PRSS35Q8N3Z0 413 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 STX19Q8N4C7 294 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 OR2Z1Q8NG97 314 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 Q9H521 79 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 GPR84Q9NQS5 396 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 SCN3BQ9NY72 215 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 CAB39Q9Y376 341 aaPredicted RBP20.81■□□□□ 0.92
VEGFA-209ENST00000425836 TEX15Q9BXT5 2789 aa20.81■□□□□ 0.92
VEGFA-209ENST00000425836 PTGES3LE9PB15 166 aa20.8■□□□□ 0.92
VEGFA-209ENST00000425836 H0YL77 283 aa20.8■□□□□ 0.92
VEGFA-209ENST00000425836 CD55P08174 381 aa20.8■□□□□ 0.92
VEGFA-209ENST00000425836 CCDC159P0C7I6 412 aa20.8■□□□□ 0.92
VEGFA-209ENST00000425836 C21orf33P30042 268 aaPredicted RBP20.8■□□□□ 0.92
VEGFA-209ENST00000425836 FDX2Q6P4F2 183 aa20.8■□□□□ 0.92
VEGFA-209ENST00000425836 WFDC11Q8NEX6 87 aa20.8■□□□□ 0.92
VEGFA-209ENST00000425836 OR2G2Q8NGZ5 317 aa20.8■□□□□ 0.92
VEGFA-209ENST00000425836 ELMOD3Q96FG2 381 aa20.8■□□□□ 0.92
VEGFA-209ENST00000425836 MRPL15Q9P015 296 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms