RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 B3GAT2Q9NPZ5 323 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 MALT1Q9UDY8 824 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 GDF2Q9UK05 429 aaPredicted RBP13.64□□□□□ -0.23
SHOX2-202ENST00000425436 TBC1D24Q9ULP9 559 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 GTF2A1LQ9UNN4 478 aa13.64□□□□□ -0.23
SHOX2-202ENST00000425436 C16orf97H3BN30 126 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 UBL3O95164 117 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 CNOT4O95628 575 aaKnown RBP13.63□□□□□ -0.23
SHOX2-202ENST00000425436 ZNF84P51523 738 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 GRB2P62993 217 aaKnown RBP13.63□□□□□ -0.23
SHOX2-202ENST00000425436 SFRP5Q5T4F7 317 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 BCL2L15Q5TBC7 163 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 FOXL2NBQ6ZUU3 175 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 C22orf34Q6ZV56 151 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 SPATC1Q76KD6 591 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 LRRTM1Q86UE6 522 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 LINC00346Q8IVM7 164 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 LINC01560Q8TB33 94 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 RAB40AQ8WXH6 277 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 HTRA1Q92743 480 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 LINC00470Q9BZP3 86 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 CRLF2Q9HC73 371 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 G6PC2Q9NQR9 355 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 ETAA1Q9NY74 926 aa13.63□□□□□ -0.23
SHOX2-202ENST00000425436 FOXD3Q9UJU5 478 aaPredicted RBP13.63□□□□□ -0.23
SHOX2-202ENST00000425436 ZNF587BE7ETH6 402 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 CTDSPLO15194 276 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 PAHP00439 452 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 EIF4EP06730 217 aaKnown RBP13.62□□□□□ -0.23
SHOX2-202ENST00000425436 ITGA5P08648 1049 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 FSTP19883 344 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 MSR1P21757 451 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 CCKARP32238 428 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 CAPZA1P52907 286 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 P2RY6Q15077 328 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 TAF13Q15543 124 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 RDH10Q8IZV5 341 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 GJC3Q8NFK1 279 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 OR4M1Q8NGD0 313 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 WACQ9BTA9 647 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 ABCG5Q9H222 651 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 NELFAQ9H3P2 528 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 GPR35Q9HC97 309 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 SLC22A13Q9Y226 551 aa13.62□□□□□ -0.23
SHOX2-202ENST00000425436 BAHCC1Q9P281 2608 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 CIB4A0PJX0 185 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 OR6C65A6NJZ3 312 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 DHHO43323 396 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 SULT1B1O43704 296 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 RAD51DO75771 328 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 APOC1P02654 83 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 SNRPBP14678 240 aaKnown RBP13.61□□□□□ -0.23
SHOX2-202ENST00000425436 HSD11B1P28845 292 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 P2RY14Q15391 338 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 CEACAM16Q2WEN9 425 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 GLT8D1Q68CQ7 371 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 MEX3BQ6ZN04 569 aaKnown RBP13.61□□□□□ -0.23
SHOX2-202ENST00000425436 BHLHA15Q7RTS1 189 aaPredicted RBP13.61□□□□□ -0.23
SHOX2-202ENST00000425436 SYT9Q86SS6 491 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 ELMOD2Q8IZ81 293 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 RFT1Q96AA3 541 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 S100PBPQ96BU1 408 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 FOXRED1Q96CU9 486 aaPredicted RBP13.61□□□□□ -0.23
SHOX2-202ENST00000425436 S100A16Q96FQ6 103 aaKnown RBP13.61□□□□□ -0.23
SHOX2-202ENST00000425436 WFIKKN1Q96NZ8 548 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 FAM206AQ9NX38 181 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 STEAP1Q9UHE8 339 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 LHFPL6Q9Y693 200 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 PRR14LQ5THK1 2151 aa13.61□□□□□ -0.23
SHOX2-202ENST00000425436 A0A0G2JMP0 313 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 A0A0X1KG70 313 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 TUBAL3A6NHL2 446 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 HNRNPCP07910 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
SHOX2-202ENST00000425436 IGFBP2P18065 325 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 PSMB1P20618 241 aaKnown RBP13.6□□□□□ -0.23
SHOX2-202ENST00000425436 COX5AP20674 150 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 IL32P24001 234 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 MPGP29372 298 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 MMP15P51511 669 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 MFGE8Q08431 387 aaPredicted RBP13.6□□□□□ -0.23
SHOX2-202ENST00000425436 ALKBH2Q6NS38 261 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 CORO6Q6QEF8 472 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 DMRTC2Q8IXT2 367 aaPredicted RBP13.6□□□□□ -0.23
SHOX2-202ENST00000425436 OR4M2Q8NGB6 313 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 ZC3HAV1LQ96H79 300 aaKnown RBP13.6□□□□□ -0.23
SHOX2-202ENST00000425436 GFI1Q99684 422 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 THAP7Q9BT49 309 aaPredicted RBP13.6□□□□□ -0.23
SHOX2-202ENST00000425436 ULBP2Q9BZM5 246 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 ACTR6Q9GZN1 396 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 LIN7BQ9HAP6 207 aa13.6□□□□□ -0.23
SHOX2-202ENST00000425436 NUFIP1Q9UHK0 495 aaKnown RBP13.6□□□□□ -0.23
SHOX2-202ENST00000425436 A0A1W2PR80 420 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 CD37P11049 281 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 ART1P52961 327 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 PSMA6P60900 246 aaKnown RBP13.59□□□□□ -0.23
SHOX2-202ENST00000425436 MRPS10P82664 201 aaKnown RBP13.59□□□□□ -0.23
SHOX2-202ENST00000425436 MRPS34P82930 218 aaKnown RBP13.59□□□□□ -0.23
SHOX2-202ENST00000425436 ARF1P84077 181 aaKnown RBP13.59□□□□□ -0.23
SHOX2-202ENST00000425436 STK11Q15831 433 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 GABRA6Q16445 453 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms